Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod08g1637 | ATGCGCGTTCTCTCGTCTCCAGAACTGTATATTGAAAGTACACCTGACACATATCCTTTGTTGATGGAGCGGTTGGGGAGCTCGAATGGCAATCAGCATATTATAGACATAACCGGAAGTGATGAAGCTTCCACTTCTGGCTCGACTCATGATAGACATTTTAATGGCGTAGATACATCATCACAGCATGAAGACAGAGTTAGTAGTGTAAGAGTACCTGTTTCTCAGCCTTCGGCATCAACCTCCAGTGTATCTAATGGATCAAATTCTAGGAATTCTTCATTCATGAGAAGAGGGGATTCGCGTCGGCATAGGAGTCCGGTGCATTCGGGCTTGTGGATATCCGTTGAGCTAGCACTCTTATTAAGCCAGATTGTTGCATCTATTGTTATTTTGTCTTTGTCAAGGCATGAGCATCCGCGCACCCCTTTGTTTGCATGGATTGTGGGTTATGCAACTGGATGTACTGCTACCCTCCCTCTGCTCTATTGGCGGTATTATCATCATAATCATATTCGAGAGCAAGATTCGTTGCAATCGCGGCAAACATCTCCTCGGATCAATGATCCTTCCGGGACATTTCTTTCCAGTTCTAGAACTAATGGAGGAGAAGATGGTCAGACTGCTGGTGCATTGTCCAGAAGCAATCAAGCTTCAACATTGATGAACAGAAGTAGAATGAAGACACTAGTGGAATACTTCAAAATATCCTTAGATTGCTTTTTTGCTGTATGGTTTGTTGTTGGAAACGTATGGATCTTTGGGGGGCATTCGTCTGCCGATGAAGCTCCTAACTTGTACAGGTTATGTATAGTGTTTCTTGCCTTTAGCTGTATTGGTTATGCTATGCCCTTCATTCTCTGTTCAACAATCTGCTGTTGTCTCCCTTGTATAATTTCCATCCTTGGTGTTAGAGAGGATCTGTCACAAAACAGAGGGGCAACTTCTGAATCCATTAATGCTCTGCCGACTTACAAGTTCAAGATGAAGAAAAATAAAAGAAGTGGCGAAAGCAACTCAGCTGCTGCTGAAGGTGTTGTGGCTGCAGGAACTGAAAAGGAGCGTGTGATATCTGGGGAAGATGCGGTTTGCTGCATCTGCCTAGCAAAGTACGAAAACAATGATGAGCTGAGAGAATTGCCTTGTTCTCATCTTTTCCACAAAGACTGCATAGACAAGTGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAGTGAGGTTGGTGAGAACGTAACTGGAGAAGATGCCAGCCAACAACAGGGTGAGAGCAGGCTTGAGAATGGCATCATCAGTGCCAGAGTTTAA | 1308 | 0.4396 | MRVLSSPELYIESTPDTYPLLMERLGSSNGNQHIIDITGSDEASTSGSTHDRHFNGVDTSSQHEDRVSSVRVPVSQPSASTSSVSNGSNSRNSSFMRRGDSRRHRSPVHSGLWISVELALLLSQIVASIVILSLSRHEHPRTPLFAWIVGYATGCTATLPLLYWRYYHHNHIREQDSLQSRQTSPRINDPSGTFLSSSRTNGGEDGQTAGALSRSNQASTLMNRSRMKTLVEYFKISLDCFFAVWFVVGNVWIFGGHSSADEAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVREDLSQNRGATSESINALPTYKFKMKKNKRSGESNSAAAEGVVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCIDKWLKINALCPLCKSEVGENVTGEDASQQQGESRLENGIISARV* | 436 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod08g1637 | 435 | MobiDBLite | consensus disorder prediction | 414 | 435 | - | - | |
Dod08g1637 | 435 | SUPERFAMILY | RING/U-box | 355 | 411 | - | - | |
Dod08g1637 | 435 | MobiDBLite | consensus disorder prediction | 32 | 95 | - | - | |
Dod08g1637 | 435 | SMART | ring_2 | 364 | 404 | IPR001841 | - | |
Dod08g1637 | 435 | ProSiteProfiles | Zinc finger RING-type profile. | 364 | 405 | IPR001841 | - | |
Dod08g1637 | 435 | MobiDBLite | consensus disorder prediction | 32 | 106 | - | - | |
Dod08g1637 | 435 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 22 | 427 | - | - | |
Dod08g1637 | 435 | MobiDBLite | consensus disorder prediction | 177 | 212 | - | - | |
Dod08g1637 | 435 | CDD | RING-H2_RNF111_like | 363 | 405 | - | - | |
Dod08g1637 | 435 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 22 | 427 | - | - | |
Dod08g1637 | 435 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 303 | 410 | IPR013083 | - | |
Dod08g1637 | 435 | Pfam | Ring finger domain | 364 | 405 | IPR001841 | - | |
Dod08g1637 | 435 | MobiDBLite | consensus disorder prediction | 175 | 212 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod08g1637 | Dod-Chr8 | 38522477 | 38531589 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod08g1637 | 16 | 411 | C3H Transcription Factor Family | AT1G80400 | 51.250 | 8.35e-141 | 407 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod08g1637 | - | - | gmx:100778728 | 675.626 |