Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1630 ATGGTCTCTAAACATAGCCACGTTTATGCTCTAAACTCTAATATAACTTGTGTTATTGTAGTTGAAGCCTTTAAACAGACAGATGTTGACTACCTCAATGAGGAAAAGGGCCAACAAAAGGATGCTGGGTCCACTGCATCAACAACTATGTTGTTGAGGGACCGAATTCTTGCTGCAAATGTTGGTGATTCCAGAGTAGTTGCATCTAGAGATGGTTCAGTACTTGTCAATATGGACATGAGTCTACACTCCATGGAAGTTGTGAACAGGCTTACAACAGCAGTTGAACTGCCCGCGGAGTTCATTCACATGTACATAACTAATTGTATATCATCTTGTGTGAACATCAAGGACAAATACATGCAGAATAGGCTTGTGAGACTTGTATGTGTTTTCCTGCAAAGTCTCATTCGAAACAACATTATCAATGTTAAAGATCTCTTCATTGAAGTTCAAGCATTTTGCATTGAATTTTCGCGGATTAGAGAGGCAGCTGCATTATTTAGGCTTCTCAAGTCATTGGAATGA 528 0.3939 MVSKHSHVYALNSNITCVIVVEAFKQTDVDYLNEEKGQQKDAGSTASTTMLLRDRILAANVGDSRVVASRDGSVLVNMDMSLHSMEVVNRLTTAVELPAEFIHMYITNCISSCVNIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1630 175 SUPERFAMILY PP2C-like 12 80 IPR036457 -
Dod08g1630 175 Pfam CCR4-NOT transcription complex subunit 11 73 172 IPR019312 GO:0030014
Dod08g1630 175 Gene3D - 3 109 IPR036457 -
Dod08g1630 175 PANTHER UNCHARACTERIZED 73 175 IPR019312 GO:0030014
Dod08g1630 175 Pfam Protein phosphatase 2C 18 74 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1630 Dod-Chr8 38243915 38246984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1630 20 75 PP2C-type Phosphatase Gene Family AT1G43900 64.286 5.35e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1630 - - fve:101312157 197.208