Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1600 ATGATCCCAGAGCTAAGACCTTCCTGTGAATTCTGCAACTCTGCTACAGCATCACAACTAGCTGTTTTATTCATTTCCTTGGGACTAATTTCTATCGGAGAGGGTTGTGTTAGACCTTGTTCAATAGCCTTTGGAGCCGATCAGCTGGAAATTAAAGAAAATTCCAACAATGAGAGGCTCTTGGATAGCTACTTTAATTGGTATTATACCTCAGTAGGGGTTTCAACTGTCCTTGCATTTAGCATAATTGTGTACATTCAAGAGAACCTGGGATGGAAGATTGGGTTTGGAGTACATGCATTGCTGATGTTTCTATCTGCTCTCAGTTTCATTGTCGGTTCACCATACTATGTTAAAATGAAACCAAGGAACAGCTTACTCAGTAGTTTTGTACAAGTAGCTGTTGTGGCCACAAAGAATCGAAAACTTGCTCTTCCTGGTTGCAACTTTGATCAGTATTATCAAGGCCATCATGATACAGAGCTGTTGGTCCCTACAGACAGCCTGAGGTTTATGAACAAAGCTTGCATTGTAAGAGATACTGAGAGAGTCGTAAACCCAGATGGATCGATTTCTGATCCATGGAGCCTATGCACACTAGGACAGGTGGAGTCACTGAAAGCTTTGTTCAGAGTCCTTCCCATGTGGTCCACAGGCATCTTTATCAAGGTGTCGCAGGGCTCATTCTCCACTCTCCAAGCGAATACCATGAACCGAAGGTTGTTTGGCAATTTCAATATGCCTGCAGCATCCTTCACTGTTATCCTTGTAATCACCCTGTCAATAGTCATTCCAATATATGACCGCATAGTGGTCCCTTGTCTAGCAAGATGCACAGGCCAGCCTAGAGGATTGAGCTGTAGAGTTCGAATGGGGATCGGATTGCTGTTTCTTTGTGCCGCAAAAGCAACATCGGCTGTAGTCGAAACTATGAGACGAAACCTGGCCATCGAAGAAGGGTTTGAGAACAATCCGAATGCTGTAATTGGCATGTCAGTTTGGTGGCTAGTTCCAGAATTTGTTTTGCTTGGATTTGGTGAGTCTTTCTATCCTGTTGGTCAGATTGAGTTTTTCTACTCCTATTTCCCAAAGAGCATGTCTAGTTTTGCAATGGCTCTTTTCGCCCTTGAACTGGCTGCCGCTGATGTAGTGGGAAGCGTGTTGGTGAACATTGTGGACAAAGTCTCCAGCATAGGAGGGAATGTAGAAAAACCTGAAGCTTCAGAAGAAGGCAAGGAAGATGAGCAATTTGATTACAGAGAGTTACCATCTTCTTAG 1278 0.4366 MIPELRPSCEFCNSATASQLAVLFISLGLISIGEGCVRPCSIAFGADQLEIKENSNNERLLDSYFNWYYTSVGVSTVLAFSIIVYIQENLGWKIGFGVHALLMFLSALSFIVGSPYYVKMKPRNSLLSSFVQVAVVATKNRKLALPGCNFDQYYQGHHDTELLVPTDSLRFMNKACIVRDTERVVNPDGSISDPWSLCTLGQVESLKALFRVLPMWSTGIFIKVSQGSFSTLQANTMNRRLFGNFNMPAASFTVILVITLSIVIPIYDRIVVPCLARCTGQPRGLSCRVRMGIGLLFLCAAKATSAVVETMRRNLAIEEGFENNPNAVIGMSVWWLVPEFVLLGFGESFYPVGQIEFFYSYFPKSMSSFAMALFALELAAADVVGSVLVNIVDKVSSIGGNVEKPEASEEGKEDEQFDYRELPSS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1600 425 MobiDBLite consensus disorder prediction 405 425 - -
Dod08g1600 425 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 393 IPR000109 GO:0016020|GO:0022857|GO:0055085
Dod08g1600 425 SUPERFAMILY MFS general substrate transporter 15 390 IPR036259 -
Dod08g1600 425 Pfam POT family 2 398 IPR000109 GO:0016020|GO:0022857|GO:0055085
Dod08g1600 425 PANTHER - 11 393 - -
Dod08g1600 425 MobiDBLite consensus disorder prediction 402 425 - -
Dod08g1600 425 Gene3D MFS general substrate transporter like domains 1 411 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1600 Dod-Chr8 37221683 37223836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1600 1 401 Organic Solute Cotransporters AT1G52190 48.675 1.29e-134 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1600 K14638 - gmx:100819779 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0978 09 30081220 30084487 Dod08g1600 08 37221683 37223836 PCT