Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1593 ATGCCGGGATTAACCTGCAACGCTTGCAACAAAGAGTTCAAGGATGATGCTGAGCAAAAACTTCATTACATGTCCGAGTGGCATCGCTACAACCTCAAGCGCAAGGTGGCTGGGGTTCCTGGTGTGACAGAAGCACTATTTCTGGCTAGACAATCTGCGCTTGCTCAAGAGAAGGACAAATCTAGTGAAACCCCCATGCTGTACAGCTGCAGCCTCTGTGGCAAAGGGTATAAAAGTGCTAAGGCTCATGCTGAGCATCTTAAATCACGTGGCCATATTGTGCGAGCTTCTGAAGGAACTAGCCAGTCAGATGAGAAGGCAATTATCAAGCCACTTCGGCAACGTGCTATGAATAGGCCTCCCCCCAGAAGAGAAGTAGAGAACTCTGAGAATGAAGGAAGTGAAGATGAGTGGGAGGAGGTTGATCCTGAAGATGATTTGGTTAATGATGCTGAAAAGTCCATGACTGATTTGAACGTGAATGATCATGATGACAATGTTGATATGGATGAAGATGATGATAATTTTGAGGAGTTGGATCCATCGTGTTGCTTTATGTGTGATCAAAAGCACAATACTATAGAAAGCTGCATGGTTCACATGCACAAGCACCATGGATTCTTCATTCCAGATGTTGAATATTTGAAGGATCCAAAAGGCCTCCTAACTTATCTTGGCCTTAAGGTCAAAAGGGACTACATGTGTCTTTACTGCAACGATCGATGTTATCCCTTCAACAGCTTGGAAGCAGTAAGGAAACATATGTCAGCTAAAAGTCACTGTAAAGTTCATTATGGTGATGGTGATGATGAGGAGGAAGTAGAGTTAGAAGAATTCTACGATTATAGCAGCAGTTATGTGGATGAGCAAGGCAAGCAGCTGGTTGTATCTGGTGATGCGGTTAACAATGTAGAACTGGGTGGTGGTGGGTCTGAGCTCATAATCACCAGGAAAACTGATGGTGGAATATCTACCAGAACACTTGGTTCCCGGGAATTTTTGCGGTATTATCGTCAGAAACCTCGGCCATCACCAGTAAACAGTATGGCCATCACTGCTGCATTGGCTTCAAGGTACAGAAGCATGGGTTTGGCCACTGTCCAATCAAGGGAGCAATTGGTGAGGATGAAAGTCCTGAAGGAAATGAATAGGTCTGGTGTGGAGAATATGCGCACTAAGATAGGGATGAAGAATAATGTCATCAGGAACTTGCCAAAGAATGTCCCATATTAG 1233 0.4436 MPGLTCNACNKEFKDDAEQKLHYMSEWHRYNLKRKVAGVPGVTEALFLARQSALAQEKDKSSETPMLYSCSLCGKGYKSAKAHAEHLKSRGHIVRASEGTSQSDEKAIIKPLRQRAMNRPPPRREVENSENEGSEDEWEEVDPEDDLVNDAEKSMTDLNVNDHDDNVDMDEDDDNFEELDPSCCFMCDQKHNTIESCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYMCLYCNDRCYPFNSLEAVRKHMSAKSHCKVHYGDGDDEEEVELEEFYDYSSSYVDEQGKQLVVSGDAVNNVELGGGGSELIITRKTDGGISTRTLGSREFLRYYRQKPRPSPVNSMAITAALASRYRSMGLATVQSREQLVRMKVLKEMNRSGVENMRTKIGMKNNVIRNLPKNVPY* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1593 410 Pfam C2H2 type zinc-finger (2 copies) 6 102 IPR041661 -
Dod08g1593 410 Pfam C2H2 type zinc-finger (2 copies) 184 285 IPR041661 -
Dod08g1593 410 MobiDBLite consensus disorder prediction 108 130 - -
Dod08g1593 410 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Dod08g1593 410 PANTHER ZINC FINGER PROTEIN-RELATED 1 410 - -
Dod08g1593 410 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Dod08g1593 410 SMART ZnF_U1_5 65 99 IPR003604 GO:0003676|GO:0008270
Dod08g1593 410 MobiDBLite consensus disorder prediction 96 144 - -
Dod08g1593 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 92 IPR013087 -
Dod08g1593 410 PANTHER ZINC FINGER PROTEIN 622 1 410 IPR040025 -
Dod08g1593 410 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Dod08g1593 410 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Dod08g1593 410 SMART c2h2final6 68 92 IPR013087 -
Dod08g1593 410 SMART c2h2final6 4 28 IPR013087 -
Dod08g1593 410 SMART c2h2final6 233 260 IPR013087 -
Dod08g1593 410 SMART c2h2final6 182 204 IPR013087 -
Dod08g1593 410 SUPERFAMILY beta-beta-alpha zinc fingers 170 243 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1593 1 410 C2H2 Transcription Factor Family AT4G31420 66.265 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod08g1593 zf-C2H2_2 2.3e-25 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1593 K14816 - gmx:100796317 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1593 08 37006092 37009674 Dod08g1593 08 37006092 37009674 ECH