Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1585 ATGATTTTCTGTAATATGATGGCCCTGTGTGGGTGTTCTCTAGTGACCAATACGTCATATCAATGTCCTGCAGATTTCAAAGGGAATAAACAATTAATGGCTGAATATTCTGCTAAGAAAGGCATTAATGGGATGATAGTCCCCAGAAAGGGGATAGGCGATCCATTTAGAGATACCGCTGATGCTAAACATCGAAATGGTCCATTGTGCAGCCGCCCGGGTTGTAGTGGTAGAGTCAAGCCTCCCAAAGTTGATAAAGCTGGATCTTCTGGAAAAGGTAAAGCTTTGAAGTATTCATTCCGATCCTCTTCAAGCGGTAAGGAAGCAGTGGGAAGTTCCTCTAGAACTACTAATAACCCAGGAAAATCACTTATAGAGCCTCAGAAAACATTATCATCTTGTTTAGAGACGGATTCATCTGAAACTAGTAGTATACAGGATGAACCAATTTCAGGGCTCATTCCTTCACCTGAAAATTTTACCGGAGGGCTTCGATTTGAAGTGGAAAATGTGGAATCTGATAAAGTCAAGGTGATGGAAATAGGAAGCTCTAGTGTAGCATCGAAGACAAGATACCAGAGGAATTTTCATCAAAAAGCTGGATTGTGTAGCCAAGAAACCAAAATCTCTGGTCCAGTGACACATGCTGCAACCAGCAGGTATGGCTTGAGGAATCTCAGATGCAACTCTGTATCTGATGTCATCCCATCGAGTTGTTCATCATCAGATTCAAACCTTAATAAAAGAAAGGATATAATAAAAAGGAGAAACTGTGAAGGGGAATGTAGTTCCAATGCTAGAGGGAAGAAGATGACTGGCTCTTCATTTGAAGGACGGAATTCTGGTGCAAGAAATGGCATATCTATCTCCGATTCACGAAGATCTAGAAATATTCCTTCTCATCAAGACAGCAGCATAGCATCAGTTAGAACTCGAAGATTCAACAGTGCTCATGCCAGGGGAAGGCTCTCCAGCCAAGTAAATGAAAACCACGTAACAACGATTGAGTCCCCTGTTATGACACCTCCTTCACCTCATTCTGGTGATCTTAACGCTCCTGGCATTTTATATCATAATCATACTTTTTCAGACACTCGTTTTAGTCGTCCAAGCTCTTATAGTAGACCAGGTACTGGCAGTGAGCAGTTTTGTGGTGTTAGGCTTGCACCACCTGCAGAATTTAACTTAATAAATCGCAATAGCTTTCGACGCCACAACATGGATGGTATTGCAGAGGTGTTTTTGGCACTTGAGAGGATTGAACGTGATGGAGAGCTAACACATGAGCAAATTCTTTTACTAGAGACCAACTTGTTACTTAATGGACTGAACTTCTTTGATCATCATAGAGACATGCGGCTGGATATTGATAACATGTCATATGAGGAACTATTGGCTCTTGAAGACAGGATGGGTTCTGTGAGCACAGCTCTAACAGAGGAAGCGCTGTCGGAATGCCTTAAAAGAAGTATCTATCAGTCTGCGCCTACGGATGATGCAGCCAAGAGTTTCAAGGAGGATAAGGATGATATCAAATGCTGCATTTGCCAGGAGGAATATGTAGTTGGAGATGAAGTGGGAATCCTGCAGTGCCAGCACAAATATCATGTAGTTTGTGTACAACAGTGGCTGAGGCTGAAGAACTGGTGCCCTATTTGCAAAGTATCAGCGGCATCGTCCAATTCATCTTCGCGCCATTGA 1701 0.425 MIFCNMMALCGCSLVTNTSYQCPADFKGNKQLMAEYSAKKGINGMIVPRKGIGDPFRDTADAKHRNGPLCSRPGCSGRVKPPKVDKAGSSGKGKALKYSFRSSSSGKEAVGSSSRTTNNPGKSLIEPQKTLSSCLETDSSETSSIQDEPISGLIPSPENFTGGLRFEVENVESDKVKVMEIGSSSVASKTRYQRNFHQKAGLCSQETKISGPVTHAATSRYGLRNLRCNSVSDVIPSSCSSSDSNLNKRKDIIKRRNCEGECSSNARGKKMTGSSFEGRNSGARNGISISDSRRSRNIPSHQDSSIASVRTRRFNSAHARGRLSSQVNENHVTTIESPVMTPPSPHSGDLNAPGILYHNHTFSDTRFSRPSSYSRPGTGSEQFCGVRLAPPAEFNLINRNSFRRHNMDGIAEVFLALERIERDGELTHEQILLLETNLLLNGLNFFDHHRDMRLDIDNMSYEELLALEDRMGSVSTALTEEALSECLKRSIYQSAPTDDAAKSFKEDKDDIKCCICQEEYVVGDEVGILQCQHKYHVVCVQQWLRLKNWCPICKVSAASSNSSSRH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1585 566 MobiDBLite consensus disorder prediction 96 150 - -
Dod08g1585 566 MobiDBLite consensus disorder prediction 336 355 - -
Dod08g1585 566 ProSiteProfiles Zinc finger RING-type profile. 513 554 IPR001841 -
Dod08g1585 566 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 33 558 IPR045191 GO:0061630
Dod08g1585 566 SUPERFAMILY RING/U-box 507 557 - -
Dod08g1585 566 MobiDBLite consensus disorder prediction 260 329 - -
Dod08g1585 566 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 33 558 - -
Dod08g1585 566 SMART ring_2 513 553 IPR001841 -
Dod08g1585 566 MobiDBLite consensus disorder prediction 267 329 - -
Dod08g1585 566 Pfam Ring finger domain 512 554 IPR001841 -
Dod08g1585 566 MobiDBLite consensus disorder prediction 64 158 - -
Dod08g1585 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 475 559 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1585 Dod-Chr8 36698960 36703491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1585 410 557 C3H Transcription Factor Family AT2G15530 41.892 1.31e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1585 - - gmx:100812055 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1585 08 36698960 36703491 Dod09g1011 09 30494961 30497976 PCT