Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1575 ATGCATGAAACTCTTATGACCAAAAGATACACTTATTCTGAGATAAGGGAAATGACCAACTCCTTCAAAAACAAACTAGGCCAAGGGGGTTATGGAAGTGTATACAAAGGGAGGCTTCCTGATGGACGTCTTGTTGCAGTGAAGATTTTAAGTGAGTTGAAAGGCAATGGAGAAGAATTCATCAATGAAGTTGCTAGTATCAGCCAAACATCTCATGTGAATGTGGTTAGTCTCTTGGGATTTTGTTTTCAAGAATCAAAAAGAGCCCTAATTATGAATTTATGCCTAATGGATCCCTTGAGAAGTTCATATATGAAAACAATGCGGCAATGGTTGATCGTCAATTGGATTGTAAAACTTTGCATGACATTGCAATTGGGACTGCTCGAGGTTTGGAGTACTTGCACAAAGGTTGCAACACTCGAATCTTACATTTTGACATCAAACCTCACAATATACTACTTGATGTGGATTTTTGCCCAAAGATTTCAGACTTTGGACTTTCAAAAATATGTCCTAGAAAAGAAAGTATTGTATCCATGTTGGGTGCAAGAGGAACTGTGGGATATATTGCTCCTGAGGTGTTTTCTAGAAATTTTGGTGGTGTATCTCACAAGTCAGATGTGTATAGTTTTGGAATGA 642 0.3785 MHETLMTKRYTYSEIREMTNSFKNKLGQGGYGSVYKGRLPDGRLVAVKILSELKGNGEEFINEVASISQTSHVNVVSLLGFCFQESKRALIMNLCLMDPLRSSYMKTMRQWLIVNWIVKLCMTLQLGLLEVWSTCTKVATLESYILTSNLTIYYLMWIFAQRFQTLDFQKYVLEKKVLYPCWVQEELWDILLLRCFLEILVVYLTSQMCIVLE* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1575 213 Pfam Protein tyrosine and serine/threonine kinase 22 126 IPR001245 GO:0004672|GO:0006468
Dod08g1575 213 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 93 IPR045874 GO:0004672
Dod08g1575 213 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Dod08g1575 213 ProSiteProfiles Protein kinase domain profile. 20 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1575 213 SUPERFAMILY Protein kinase-like (PK-like) 6 126 IPR011009 -
Dod08g1575 213 PANTHER - 6 93 - -
Dod08g1575 213 ProSitePatterns Protein kinases ATP-binding region signature. 26 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1575 Dod-Chr8 36275164 36275805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1575 6 111 Receptor kinase-like Gene Family AT5G38280 58.182 2.98e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dod08g1575 PK_Tyr_Ser-Thr 4.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1575 - - tcc:18602017 143.665