Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1564 ATGTCCATGGATCCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAGCAGATCCTCAAGAAATGGAGAAAGCTAGCCAGCTCTTCAAAAGCCAGCACCACCAGTAACAACAACACCACTAGCACAACCACCAGCAGTAAAAGCATGAAGTTCCTGAAAAGAACACTTTCTTTGTCTGAACGTGAGGGAGGACCAAGCAATAATGCTGTTCCAAAAGGGTACCTAGCTGTTTGTGTTGGCGAAGAGCTCAAGAGGTTCACCATACCAACTGAGTATTTGGGTCATCAGGCCTTTCAGATACTACTCAGAGAGGCAGAGGAAGAGTTTGGGTTTCAACAGACTGGTGTCCTCAGGATCCCTTGTGAGGTTCCAGTTTTTGAGAGTATCTTGAAAGTGGTGGAGGGAAAGAAGGACAAGGATTCTTCCACAATGGAATGCAGACTTAGTGTTGAAGAGATCATGGGATATTGCTCCTCTTCAGAAAACCAACTTGCTTATTCTCACCATCCTCAAAGTCCATTGTGTAGATAG 537 0.4395 MSMDPKKSNKIREIVRLQQILKKWRKLASSSKASTTSNNNTTSTTTSSKSMKFLKRTLSLSEREGGPSNNAVPKGYLAVCVGEELKRFTIPTEYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVPVFESILKVVEGKKDKDSSTMECRLSVEEIMGYCSSSENQLAYSHHPQSPLCR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1564 178 Pfam Auxin responsive protein 24 134 IPR003676 GO:0009733
Dod08g1564 178 MobiDBLite consensus disorder prediction 31 50 - -
Dod08g1564 178 PANTHER SAUR FAMILY PROTEIN 7 178 - -
Dod08g1564 178 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 178 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1564 Dod-Chr8 35837460 35837996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1564 3 178 Calmodulin-binding Proteins AT4G31320 52.525 7.92e-62 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1564 K14488 - gmx:100799598 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1041 09 30865810 30866319 Dod08g1564 08 35837460 35837996 PCT