Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1556 ATGCCACCATTGCTGGCACGTACATTTCCTATTTATACCCGTGAAGCTGCTTCTCTCATTCCCTTTTCTTCTCCTTCTCTCTCTTCCCCCTCTTCTCTCTCACTCTACGGCGAAATGGAGCCCAAATCTGGCATCGGTATGGCGGCGCCGTCGGTGTTCTCCGGCTTTGGCGACTTCAGGCCAGTCCCGTCCGAGTGGGATCTCGAGGACCTCATGAAGAACTTGATAGCAAACGGATCATCGTCCGGGAACGACAAATACGGCGGCAGCGACGTGAAACCGTGCATGACAGATCCATTCATCGGCAGCTGCGGTGGCTGTGTGTCCGCCGATCTTTCAATCGATGATATCACCGCCACCTCGGCCGCCGGTTTCCGAAACCCGGATGTGGTGGTGACTGCATTTACAACTTGTACTAGTGGAGTTACAGATAATACCAAGTTTGTCTGTTCCCAGAACCTCACTCCCAAGCATTCAACCATTGATTCTCAGTCATCCATTTGTGGCACTGTTAGCAGCCCGGTGTCTGCTAATGAACCAAACGGCGGATGCAATCAAGCCAAAGTAGCCACTACCAGTGGTTCCTCACGTGATCCGTCTGATGAGGATGATGAAGCGGGTCCTTGTGAACAAAGCACAAACCCTAATGATATGAGGCGCCTTAGAAGGAAGGTTTCTAACCGCGAGTCTGCCAGGAGATCCAGAAGAAGGAAACAAGCGCATTTGGTTGACCTTGAGTCGCAGGTTGAACAGCTGAGGCTGGACAATGCAGCGCTATACAAGCAGCTTTCAGATGCCAGCCAACAATTTCGTGACGCCAATACAAATAACCGGGTGCTTAAGTCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCGCTCGGGGCTCTTTCACCACCATGAACAACCAACTTGTTGATCAGAATCATCATCACGGTCAACTCAACACAAATAATCTACCCTGCATGACACATGTCTCGCCAAGCATCACTGTCGTCCATGGGAATAAAAATGATTCCTCATATGAGAGTTGTATTACTACTGTTGGTGGACAGAGCTCATCAGCTCGTGGAGGACTTGGAGACTTGGATATAACTAATTTCAGCGACTTCAACAATGCTATCATAAGCGATGCTGTGAGCTCTGTCACTAAAATATGGCCCTTAGATTAG 1188 0.4941 MPPLLARTFPIYTREAASLIPFSSPSLSSPSSLSLYGEMEPKSGIGMAAPSVFSGFGDFRPVPSEWDLEDLMKNLIANGSSSGNDKYGGSDVKPCMTDPFIGSCGGCVSADLSIDDITATSAAGFRNPDVVVTAFTTCTSGVTDNTKFVCSQNLTPKHSTIDSQSSICGTVSSPVSANEPNGGCNQAKVATTSGSSRDPSDEDDEAGPCEQSTNPNDMRRLRRKVSNRESARRSRRRKQAHLVDLESQVEQLRLDNAALYKQLSDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVARGSFTTMNNQLVDQNHHHGQLNTNNLPCMTHVSPSITVVHGNKNDSSYESCITTVGGQSSSARGGLGDLDITNFSDFNNAIISDAVSSVTKIWPLD* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1556 395 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 217 280 IPR004827 GO:0003700|GO:0006355
Dod08g1556 395 MobiDBLite consensus disorder prediction 158 196 - -
Dod08g1556 395 CDD bZIP_plant_GBF1 220 271 IPR045314 GO:0003700|GO:0006355
Dod08g1556 395 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 222 237 IPR004827 GO:0003700|GO:0006355
Dod08g1556 395 PANTHER BASIC LEUCINE ZIPPER 9 115 393 - -
Dod08g1556 395 Pfam bZIP transcription factor 218 268 IPR004827 GO:0003700|GO:0006355
Dod08g1556 395 MobiDBLite consensus disorder prediction 158 242 - -
Dod08g1556 395 Coils Coil 235 297 - -
Dod08g1556 395 Gene3D - 218 274 - -
Dod08g1556 395 PANTHER BASIC LEUCINE ZIPPER 63 115 393 - -
Dod08g1556 395 SMART brlzneu 215 279 IPR004827 GO:0003700|GO:0006355
Dod08g1556 395 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1556 Dod-Chr8 35602826 35608556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1556 148 393 bZIP Transcription Factor Family AT5G24800 49.802 6.11e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod08g1556 bZIP_1 5.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1556 K25784 - gmx:778193 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1045 09 30909349 30913756 Dod08g1556 08 35602826 35608556 PCT