Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1526 ATGACTGTTTCTGTATTGCCCGGGAATTCTGATCAGGCCGAGAGCAGCACCTCAGGCTCATTCCCCTTCTCATCATCATCAACACAGCCACCACAAACAACAACAACAAAGTCATCGAAGGCAAAGCGCAACCGAGACACCAACAACAAGCATCCATTGTACCGAGGGGTGCGGATGCGCAACTGGGGGAAATGGGTGTCTGAAATCCGGGAGCCGCGCAAGAAATCGCGCATATGGCTCGGCACGTTCCCGACCCCTGAGATGGCCGCAAGGGCTCACGACGTCGCCGCGCTCAGCATCAAGGGCGAGTCCGCCATCGTCAACTTCCCCGACCTCGTACACTTGCTCCCTCGTCCTGCTTCCTCGTCGCCTAGCGACGTTCAAGCCGCAGCAGCAAAAGCAGCTCGCATGGACAACTTTGAATTGCAATTATCATCATTGTCTTCATCGTCTTTGTCGTCCTCTTCTTCTTCGGCGACACTGTCCTCTTCGTCTTCTTCCTCATTGTCTTCGTTAGTTTCGGCAATGGACTTGTCCGAGGGGTCCGAGGAGCTGAGCGAGATCATTGAGCTGCCGAGGTTGGAGACGGGGGATGACTTCGGGAAGGAGTTTGTTGTGTTCGTGGACTCCGAGGAAGCATGGATGTACCAGCCACCGATGCCGTGGCTGCAGAACGCGGAAGGAGATGGCTATTGTGATGACGGGTATGTTGTTGGTGGTGAGTTTGAGGTGCCTGAGACGGGGGTAGTTAATGGTTTTGAAAGTTTTATATGGAATTACTAA 783 0.5377 MTVSVLPGNSDQAESSTSGSFPFSSSSTQPPQTTTTKSSKAKRNRDTNNKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGESAIVNFPDLVHLLPRPASSSPSDVQAAAAKAARMDNFELQLSSLSSSSLSSSSSSATLSSSSSSSLSSLVSAMDLSEGSEELSEIIELPRLETGDDFGKEFVVFVDSEEAWMYQPPMPWLQNAEGDGYCDDGYVVGGEFEVPETGVVNGFESFIWNY* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1526 260 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Dod08g1526 260 MobiDBLite consensus disorder prediction 39 53 - -
Dod08g1526 260 Pfam AP2 domain 52 102 IPR001471 GO:0003700|GO:0006355
Dod08g1526 260 Gene3D AP2/ERF domain 53 111 IPR036955 GO:0003700|GO:0006355
Dod08g1526 260 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Dod08g1526 260 SUPERFAMILY DNA-binding domain 53 111 IPR016177 GO:0003677
Dod08g1526 260 MobiDBLite consensus disorder prediction 1 38 - -
Dod08g1526 260 MobiDBLite consensus disorder prediction 1 54 - -
Dod08g1526 260 CDD AP2 52 112 IPR001471 GO:0003700|GO:0006355
Dod08g1526 260 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 258 - -
Dod08g1526 260 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 14 258 - -
Dod08g1526 260 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Dod08g1526 260 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1526 Dod-Chr8 33214133 33215297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1526 40 231 AP2-EREBP Transcription Factor Family AT5G11590 60.606 3.92e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod08g1526 AP2 6.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1526 K09286 - gmx:100305349 243.047