Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1524 ATGGAAGCACCCAAGTTTTTCCACAACAGCTTCCCCTTCGACAACAACCACACCACCAACAATGCTGGCACTTCCGACCATTTCATCGTCGAGGACCTCCTTGACTTCTCCAACGATGATGCCATCATTGTTGACACCACGTTTGATTCTGTCATCGGAAACTCCACCGATTCTTCCACCATAACAGTCGTTAATAGCTGCAACTCTTCCTCCCCATCCAGGGGCGATCTCAATTTCGTCACCGATATTGCTTCCCAAAATCTCACTGACAGCAATTTCTCTGGTGATCTTTGCGTTCCGTGCGATGATTTGGCGGAGCTGGAGTGGCTTTCCAATTTCGTGGAGGAATCGTTTTCGAGCGAGGACTTGCAGAAGTTGCAGCTGATATCAGGCGTGAAGACACCAAACGATGCCCCATCGGAGGCCCACGAGTTCAACCCAATAGAGCCCAACCAAAATAGCCCAATATTTAACCCTGAAGTGCCTGTCCCAGTCAAGGCCCGTAGCAAGAGGACTCGTGGGTCCCCACGCAACTGGACCTCACGCCTCCTTGTCCTATCCCCAACGACGTCGTCTTCAGAACCAGACCTCATGGTCCCTACGCCCACACCCGCCACCACTGCAGTTCCGATCATCGGCAAAAATCCTGCAAAGGCGGCACCTAAAAAGAAAAATGGCAGGGATGGCAGTGGAGATGGCCGAAAGTGCCTGCATTGCTCGACGGACAAGACACCACAGTGGCGGACTGGGCCCATGGGCCCAAAGACGCTGTGCAATGCCTGCGGTGTGAGGTACAAGTCAGGTCGGCTAGTGCCTGAATACAGGCCCGCAGCCAGCCCGACTTTTGTGCTGACCAAGCACTCTAATTCGCACCGCAAGGTGTTGGAGCTGCAGAGGCAGAAAGAGATAGTGCGAGTGCAGCAGCACCAGCAGTTCCTACAACATCATCAGAATATGATTTTTGACGTAACAAACGGTGATGATTACTTGATCCACCAACATGTTGGACCAGATTTCAGGCAGCTAATCTAG 1032 0.5233 MEAPKFFHNSFPFDNNHTTNNAGTSDHFIVEDLLDFSNDDAIIVDTTFDSVIGNSTDSSTITVVNSCNSSSPSRGDLNFVTDIASQNLTDSNFSGDLCVPCDDLAELEWLSNFVEESFSSEDLQKLQLISGVKTPNDAPSEAHEFNPIEPNQNSPIFNPEVPVPVKARSKRTRGSPRNWTSRLLVLSPTTSSSEPDLMVPTPTPATTAVPIIGKNPAKAAPKKKNGRDGSGDGRKCLHCSTDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELQRQKEIVRVQQHQQFLQHHQNMIFDVTNGDDYLIHQHVGPDFRQLI* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1524 343 ProSiteProfiles GATA-type zinc finger domain profile. 230 266 IPR000679 GO:0006355|GO:0043565
Dod08g1524 343 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 294 - -
Dod08g1524 343 ProSitePatterns GATA-type zinc finger domain. 236 261 IPR000679 GO:0006355|GO:0043565
Dod08g1524 343 Gene3D - 229 280 IPR013088 GO:0006355|GO:0008270
Dod08g1524 343 PANTHER GATA TRANSCRIPTION FACTOR 1 343 - -
Dod08g1524 343 SMART GATA_3 230 280 IPR000679 GO:0006355|GO:0043565
Dod08g1524 343 MobiDBLite consensus disorder prediction 189 233 - -
Dod08g1524 343 CDD ZnF_GATA 235 282 IPR000679 GO:0006355|GO:0043565
Dod08g1524 343 PANTHER GATA TRANSCRIPTION FACTOR 1 343 - -
Dod08g1524 343 Pfam GATA zinc finger 236 269 IPR000679 GO:0006355|GO:0043565
Dod08g1524 343 PIRSF Txn_fac_GATA_plant 8 325 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1524 Dod-Chr8 33061179 33063473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1524 2 343 C2C2-Gata Transcription Factor Family AT5G25830 51.247 1.01e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod08g1524 GATA 3.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1524 - - zju:107420464 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1524 08 33061179 33063473 Dod08g1524 08 33061179 33063473 ECH