Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1517 ATGTATATTTTGGCTCGTTCCACCGACTTTAGTGGGGTGGGCTTATTTACCAGCCCTATAGTTGGCTCCAATATTCTTGCCTGGAAATGCAGTAAAGGTGCAAGTAGCTCTAATGTCCATGCAAACGCCGAGGGATGGTGTAGGAGATCGTCGATTCTCCGCGATTGTTTCCAGAACCTTCATGAATCTTCCCATAGCGATGATGCTGATAGGGCTCTCCCTCTTCATGGCCCAAAATGCAACATAAGCCTTAAGATGCCTGAACTGCGTAGCAGAGCACGCAGAAACCGGGCTCCATTACCCAACCCAAACCCAAGCCCAAGCCCAAACCCGAATCCGATTACCCGACCCGCAGTGAGAACCCGCCGGGGGGGCAGAAGAAGAAGGGGAAACGTCATCGCAGCAGGTGATGCAATCGATAACAACCTCAATCATAATCGTAACCGTCTTGTGAATAACGAAGCCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAAGACAAGAACAACACGAGATTCCGCTTAGGGTTTCGAGAGAGGAAAAGAAAGCCATGGATGACGACTATGACAGCGGTGGCCGGAGCGCCGATAAGGCTCCCGCCGGTGAAGAAGAAGGAAGCACCGCTCCTCTTCCCGAAAAGGTACAGGTTGGTGGTTCTCCCGTGTACAGACTCGAGAGGAAGCTCGGGAAGGGAGGGTTTGGACAAGTCTATGTTGGTCGGCGCGTCGGGGCTTCGAGTTCTAGTGACCGGACCGGGTGCCGGAGCTTTAGAGGCATGACAGTAGCTTTGAAGTTTGAACACAGAAGCAGTAAGGGGTGCAACTATGGACCTCCTTATGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCATGGTGTTCCACGTGTTCATTACAAAGGGCGGCAAGGCGATTACTATGTTATGGTCATGGATATGCTTGGCCCTAGTCTATGGGATGTTTGGAATAACAACTCGCATATGATGTCTGTCGAGATGGTGGCATGTATAGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCCCCCCAGGAACTCCTGATGAGAAAAAGCTGTTTCTGGTTGATCTTGGACTAGCAACTCGCTGGCGTGACAGTTCGACTGGTCTTCACGTTGAGTACGATCAACGTCCAGATGTATTTAGGGGGACAGTTCGGTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGATTTGGAATCTCTGGCATACACGCTAATCTTTCTTCTTCGTGGCCGGTTACCTTGGCAAGGATATCAGGGCGAAAATAAAGGATTTCTGGTCTGCAAGAAGAAGATGGCCACTTCCCCGGAAACTTTGTGTTGCTTTTGTCCTCCACCTTTTCGGCAGTTTGTTGAGTATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATACGTATCCCTTTTCGATGGAATTGTTGGTCCAAATCCAGACATCAGGCCAATAAACACTGATGGTGCTCAGAAGCTGATATATCAGGTTGGACATAAGAGAGGACGATTGACCATGGAAGATGATGATGATGAACAACCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACGCAATGGATTAGTGTTTATAATGCTCGCCGACCAATGAAACAAAGGTACCATTACAATGTTGCTGATGTGCGGCTGTCCCAGCACATCGAGAAGGGTTATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGTTGCTCTAATCTGTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTTCACAAGTTCATGAGCTATCACCCTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAGAATTATTACATTAGTGCCATAGCTGGAGCTAATAATGGGAGCTCATTGGTTGTAATGTCTAAAGGGACTCAGTACTTGCAGCAATCCTATAAAGTCAGTGATTCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCGACTGCTGGAAGTAGATGGGCTATTGTTATGTCTCGTGGTGCTGGATTTTCAGACCAGGTTGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGTATTCATAGAAGGTGGGATAATGGTTACCGCATCACTTCAACTGCTGCTACATGGGACCAAGCAGCTTTTGTTCTTAGCGTACCAAGAAGAAAACCTGCTGATGAAACTCAAGAGACACTCCGCACATCTGCCTTTCCCAGTATGCATGTCAAGGAGAAATGGGCGAAGAACCTCTATATTGCATCTATTTGTTATGGGAGAACAGTTTCATGA 2388 0.464 MYILARSTDFSGVGLFTSPIVGSNILAWKCSKGASSSNVHANAEGWCRRSSILRDCFQNLHESSHSDDADRALPLHGPKCNISLKMPELRSRARRNRAPLPNPNPSPSPNPNPITRPAVRTRRGGRRRRGNVIAAGDAIDNNLNHNRNRLVNNEAKEEEEEEEEEEEERQEQHEIPLRVSREEKKAMDDDYDSGGRSADKAPAGEEEGSTAPLPEKVQVGGSPVYRLERKLGKGGFGQVYVGRRVGASSSSDRTGCRSFRGMTVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHMMSVEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPPPFRQFVEYVVNLKFDEEPNYAKYVSLFDGIVGPNPDIRPINTDGAQKLIYQVGHKRGRLTMEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTSQVHELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSMHVKEKWAKNLYIASICYGRTVS* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1517 795 MobiDBLite consensus disorder prediction 64 219 - -
Dod08g1517 795 ProSiteProfiles Protein kinase domain profile. 225 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1517 795 MobiDBLite consensus disorder prediction 171 203 - -
Dod08g1517 795 PANTHER - 185 769 - -
Dod08g1517 795 PANTHER CASEIN KINASE-RELATED 185 769 - -
Dod08g1517 795 SMART serkin_6 225 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1517 795 MobiDBLite consensus disorder prediction 100 114 - -
Dod08g1517 795 CDD STKc_CK1 225 504 - -
Dod08g1517 795 Gene3D Transferase(Phosphotransferase) domain 1 192 550 - -
Dod08g1517 795 MobiDBLite consensus disorder prediction 156 170 - -
Dod08g1517 795 Coils Coil 143 175 - -
Dod08g1517 795 Pfam Protein kinase domain 225 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1517 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Dod08g1517 795 SUPERFAMILY Protein kinase-like (PK-like) 225 510 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1517 Dod-Chr8 32607947 32616161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1517 225 390 EF-hand Containing Proteins AT1G35670 27.545 1.69e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dod08g1517 Pkinase 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1517 - - cit:102627154 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1127 09 31989996 31996495 Dod08g1517 08 32607947 32616161 PCT