Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1502 ATGAAGAAGGTTGAAGAGATTAGCGTTCTTTGTGGGATAGAAGCTTGTGCTATTATCTATGCTCCCAATGAACCTCAGCCAGAGGTTTGGCCATCCCCTTGTGAGGTTGTAAAGGTAATATCTAGGTTTAGAAGAATACCTGAAGTGGAACAAAATAAAAAGATGATGACTCAAGAGATCTTCTTAAATCAAAGGATTCAAAAGACCCAAAAGACCCAAAAGCATATAACAAAACAAAGCAAAGATAACCGAAAGAAAGAGATGAATAACCTCATCTTCCAGTGCTTGAGTACTGGTATGGTCATGGAGAATATCAAGATAAATGATCTTGATGATCTCTTCTGGATGATTGATTAG 357 0.3725 MKKVEEISVLCGIEACAIIYAPNEPQPEVWPSPCEVVKVISRFRRIPEVEQNKKMMTQEIFLNQRIQKTQKTQKHITKQSKDNRKKEMNNLIFQCLSTGMVMENIKINDLDDLFWMID* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1502 118 Gene3D - 1 67 IPR036879 GO:0003677|GO:0046983
Dod08g1502 118 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 118 - -
Dod08g1502 118 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 1 118 - -
Dod08g1502 118 SUPERFAMILY SRF-like 1 67 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1502 Dod-Chr8 31555589 31555945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1502 4 118 Type I MADS-box Gene Family AT5G48670 51.304 3.35e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Dod08g1502 SRF-TF 7.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1502 - - gmx:100813231 141.739