Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1495 ATGCCCTTCATTCTATGTGCAACAAGCTGCTGTCTGCCTTGTATAATTTCTTTCCTTGGGGTTAGAGAGGATCAGACACAAACCCGAGGTGCAACCTCTAAATCAATTGATGCTTTGCCAACTTACAAGTTCAAGATGAAGAAAAATAGAAGCAGGGGTGAAAGCAACTCAGACGTCGATGAAGGTGGAATTTTGGCTACGGGAACTGAAAAGGAACGAACGATATCCGGTGAAGATGCAGTTTGCTGCATCTGCCTGGCCAAGTATGAAAACAACGATGAGCTGAGAGAATTGCCTTGTTCTCATCTTTTCCACAAAGAATGCGTGGATAAGTGGTTGAAGATAAATGCATTATGCCCTATTTGCAAGAGTGCGGTTGGTGAGAATGTAATAGGATCAGTATTTGGGGAGTATGCAAACTAA 423 0.4279 MPFILCATSCCLPCIISFLGVREDQTQTRGATSKSIDALPTYKFKMKKNRSRGESNSDVDEGGILATGTEKERTISGEDAVCCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPICKSAVGENVIGSVFGEYAN* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1495 140 Pfam Ring finger domain 82 123 IPR001841 -
Dod08g1495 140 ProSiteProfiles Zinc finger RING-type profile. 82 123 IPR001841 -
Dod08g1495 140 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 139 - -
Dod08g1495 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 130 IPR013083 -
Dod08g1495 140 SUPERFAMILY RING/U-box 75 128 - -
Dod08g1495 140 SMART ring_2 82 122 IPR001841 -
Dod08g1495 140 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1495 Dod-Chr8 31116052 31116819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1495 1 129 C3H Transcription Factor Family AT1G80400 61.832 1.84e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1495 - - gmx:100775815 241.891