Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1477 ATGAGAACCAAGACTCTCGGTGGACGTAGGAAGCGTCCACGCTCTGCAACTCGTCCTTCTCTCACCGCCACTCAGGACGAACATGGTGCATCTGAGTATGATACATCACGTGATAATGATGATGAACTTAGAGATGTTCCAATAGCTAATTGCGTTGATCAGCATTCTAACGGAAGCCCTCTTGATGTTTCGAATCACAAGTCTATAGATTCGTTGGAGAAGGATATTTGCATATGTTGCACAAAAGGTGGGGGAGTGTTAGTTTGTAGTGAAAGGGGTTGCCCTGTGGCTCTCCACGCCAAGTGTTTCTGTTCTGAACCTAAATTTGATGATTCGGGTAACTTCTACTGCCCCTACTGCTGCTACAAGCGAGCGGTCGACGAGAGACGAGAGTTGAAGAGAAAGGCCATGATAGCAAAGAAAGCTTTGTCAAGCTTTTTGGATAAAGATGTGGTTACGAGTGACGAATTGGCGCAGGAGGCTGAGGCTGCTAAGAGGAAAGAGCCCCATGATGGAGATGATGGGATCTCATTAGGCGGTGAGAATGGGCTGGGCACTGATGGCGCCAACATTCAGCCATTGCGGCCTGAGGGAGACCAACCAAGAAAATTGCAAGAAGCAGACAGTGATCGATGTGAGATAGCAGTTGAAGATCAAGCTGATGGAGATGGTGATTTTAGACCTTGTAGAGAAGAAGAGATGCCGGTAGGTATTAATCTGGTTCAGGATTCCATGAACCAGGAGAAATTAGATGAACCGAACAAAACTGAAACAGATGAGGTCAGAGTATTGGAATTGAAAGAAAGCTTTGAAACAGAGGATTCAAGACGTAATATGGAGGATGTACATGTAATAACTGACGAGGTTGACAAGGAAGCAGAACCTTTGACTGCTTTGCATTTGGGAAAGCGTACTGACGGACGTTCACTGGGAATAGCATTTGCCAAAGGGACCCAACAAAGTGTTGTGAAATCTTCAGAGAAGGGCAGGATGACAGATAAAGGAAAGGTGCCCGATAGAGAAAAAAGGGTGTCTGCAACAGGTAGTTCTGTGAGCGAAACTAATGATTCAGATTCTGAGGTCATCTCAGGGAGAAAACGCCACCGCAAAAGGAAGGTCCAAGAAACAGCATATCCTCAGAGTGTTGCTTCTGTCAGGAAATCATTATTGAAGGATCATAAGAATAAAGGGGAAAATGCTAGTGACATGAATGGGGAAGTTACCAGCTCTAGAAGTAGAAGAAAATCACAGAGTTTGCCAAAGCGAGTCAATAATTGGACTTCACTGATAAGGCGTAAGAAATTACTTTGGACTGCTGAAGAAGAAAAAGCTCTGCAGGATGGAGTGTTAAGGTTCTCAAAGGAAAATCAGCATATCCCTTGGAGGAGAATTTTAGATTCTGGTCATCATATTTTTGATAAGACTCGTACACCTGTTGACCTCAAGGATAAATGGAGAAATATGAATTCTGTGTGCTGCATATGCACTCATTTTGTGCATTTTGTTGGAGGGGAACGCTGA 1521 0.4425 MRTKTLGGRRKRPRSATRPSLTATQDEHGASEYDTSRDNDDELRDVPIANCVDQHSNGSPLDVSNHKSIDSLEKDICICCTKGGGVLVCSERGCPVALHAKCFCSEPKFDDSGNFYCPYCCYKRAVDERRELKRKAMIAKKALSSFLDKDVVTSDELAQEAEAAKRKEPHDGDDGISLGGENGLGTDGANIQPLRPEGDQPRKLQEADSDRCEIAVEDQADGDGDFRPCREEEMPVGINLVQDSMNQEKLDEPNKTETDEVRVLELKESFETEDSRRNMEDVHVITDEVDKEAEPLTALHLGKRTDGRSLGIAFAKGTQQSVVKSSEKGRMTDKGKVPDREKRVSATGSSVSETNDSDSEVISGRKRHRKRKVQETAYPQSVASVRKSLLKDHKNKGENASDMNGEVTSSRSRRKSQSLPKRVNNWTSLIRRKKLLWTAEEEKALQDGVLRFSKENQHIPWRRILDSGHHIFDKTRTPVDLKDKWRNMNSVCCICTHFVHFVGGER* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1477 506 MobiDBLite consensus disorder prediction 401 421 - -
Dod08g1477 506 MobiDBLite consensus disorder prediction 318 421 - -
Dod08g1477 506 Coils Coil 122 142 - -
Dod08g1477 506 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 38 490 - -
Dod08g1477 506 MobiDBLite consensus disorder prediction 1 16 - -
Dod08g1477 506 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 38 490 - -
Dod08g1477 506 ProSiteProfiles Myb-like domain profile. 429 489 IPR001005 -
Dod08g1477 506 MobiDBLite consensus disorder prediction 159 175 - -
Dod08g1477 506 MobiDBLite consensus disorder prediction 159 207 - -
Dod08g1477 506 CDD SANT_TRF 437 489 - -
Dod08g1477 506 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 167 IPR013083 -
Dod08g1477 506 SUPERFAMILY FYVE/PHD zinc finger 73 129 IPR011011 -
Dod08g1477 506 MobiDBLite consensus disorder prediction 1 41 - -
Dod08g1477 506 MobiDBLite consensus disorder prediction 327 343 - -
Dod08g1477 506 Gene3D - 437 498 - -
Dod08g1477 506 SMART sant 433 491 IPR001005 -
Dod08g1477 506 SUPERFAMILY Homeodomain-like 431 490 IPR009057 -
Dod08g1477 506 ProSitePatterns Zinc finger PHD-type signature. 77 120 IPR019786 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1477 434 493 Single Myb Histone (SMH) Gene Family AT3G49850 45.902 3.26e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1477 - - aip:107605217 509.605