Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1473 ATGACGACAGTGAAATTCTCGGGTGTACTGGTGGCGCAAGGTTCCCGTTTTCTTCGAAGGAGCCTCAGGTTTTGGCCGAGCTCGAACGCTAACCTGAGAAATTCGCGTGCGTTTGCGATGGATGCGACTGTTTCCAATGGCGGCGGCTGCGTGGTTCGCTTCCCGTTGTCTGCGTCCAGCGCTCTGGTCATTCAGAAAGGAGACATTACCAAATGGACCATTGATGGTTCCACTGACGCAATAGTAAATCCCGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCGGACGGAGCTATAAATAGAGCTGCAGGCCCAGAACTTCTTCAAGCATGCCTCGACGTTCCGGAAGTCAGACCCGGAGTACGCTGTCCGACGGGGGAAGCAAGGATCACGCCAGGTTTTAAGCTTCCTGCTTCTCATGTTATTCATACTGTTGGACCAATCTTCAATGTGGACAGTTACCCTGCTGCTTCTCTGGCTAGTGCTTACAGGAATAGTTTGAGGGTGGCAAAAGAGAACAATATTCAGTATTTAGCATTCCCAGCCATATCTTGTGGTGTCTATGGCTACCCTTATGATGAAGCAGCTACAGTGGCTATTTCTTCTATCAAAGAGTTTGGAAATGACTTTAAGGAGGTCCACTTTGTGCTGTTCTCGCCTGATATTTATGACATTTGGTTAAATAAGGCAAATGAGATGCTGAAAGATTAG 711 0.4824 MTTVKFSGVLVAQGSRFLRRSLRFWPSSNANLRNSRAFAMDATVSNGGGCVVRFPLSASSALVIQKGDITKWTIDGSTDAIVNPANERMLGGGGADGAINRAAGPELLQACLDVPEVRPGVRCPTGEARITPGFKLPASHVIHTVGPIFNVDSYPAASLASAYRNSLRVAKENNIQYLAFPAISCGVYGYPYDEAATVAISSIKEFGNDFKEVHFVLFSPDIYDIWLNKANEMLKD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1473 236 SUPERFAMILY Macro domain-like 61 232 IPR043472 -
Dod08g1473 236 Gene3D Leucine Aminopeptidase, subunit E, domain 1 45 236 IPR043472 -
Dod08g1473 236 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 25 235 - -
Dod08g1473 236 CDD Macro_OAADPr_deacetylase 62 231 - -
Dod08g1473 236 ProSiteProfiles Macro domain profile. 49 234 IPR002589 -
Dod08g1473 236 Pfam Macro domain 82 199 IPR002589 -
Dod08g1473 236 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 25 235 - -
Dod08g1473 236 SMART YBR022w_8 61 199 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1473 Dod-Chr8 30417664 30421025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1473 67 212 C2H2 Transcription Factor Family AT5G01310 30.247 3.56e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1473 K23518 - gmx:100811169 348.206