Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1469 ATGGGAGATTGGTTTCAAAACAGCCTCATACATGAGCTACTACAAGGCATGGAGCTGACAAGGCAGCTCCAAATGTATCTCCACGTGGCGTCTTCGTCCCAGGAAACATGTGACCTCTTGATCCAGAAGATCATAGATTCATTGGAACAGGCACTTGAATTGGTGAAGAGGGTTGGTGGGCCATTGAGTGAGCCATCACAAATGCCTCCCGCACGAGTCGCAATCCGACTGTCAGAGTCACCATCTTTGAGCGGAAGTCCCCATAGCGAAGATTCTAACAGAGATTTGAAGGACCCGAAGATGGGTGCCTCCAGAAAGAGGAAGACTATGCCAAAGTGGACAAAGCGGATTCGAGTTAGCCCAGGGATGGCAGTTGAAGGGTCACTTGATGATGCATATAGTTGGAGAAAATATGGCCAGAAAGACATTCTTGGAGCCAAGCATCCAAGAGGCTATTATAGATGCACCCATAAAAATGTTCAAGGCTGCATGGCAACAAAGCAAGTGCAAAGATCAAATGAAGACCCAACGGTCTTTGAAATCACTTACCGGGAGAAGCACACCTGCACAATGGCCTCCAATGCTGTTGAAAACTCAAGACCGCAAGAAAACCAAGAACCAAATTTGGGCACAGGTCTACAACAGCAGAATGGCCACCAAAACCTTGAACAGCAATCGAATGATCTACTCTTGAACCTCCGTGCAGACTTGAGAGTCCTAACAGAGCAACCGTTTGCTTCAATCCATTTCCCTTCGACCTCAAACATAAAAACTGAAGAGCAAGTTAATTTCCCTGCAGCAATGATTGATAACAACTTTGCAGAAGAGTTCAATTATCCTTCGTACGTGTCCCCGTATGTATCCCCTACAACATCCGGAACATCCTACTTTTCGGTGTCTCCAAGTGGAGGGGACAGCTTTGGGGGGCACCCAAATCTGTCAAGTTCTGGGTCTGAGATCAACATGATCTCAGCTACTATATCAGCTGCAAATTCTCCGACGGTTGCCTCAGATTTTCGATTTGATCAGTTTGAACTAGGCGGGGAGAACTTCACCTTCGATATCACACGATTCTCCTAA 1080 0.4657 MGDWFQNSLIHELLQGMELTRQLQMYLHVASSSQETCDLLIQKIIDSLEQALELVKRVGGPLSEPSQMPPARVAIRLSESPSLSGSPHSEDSNRDLKDPKMGASRKRKTMPKWTKRIRVSPGMAVEGSLDDAYSWRKYGQKDILGAKHPRGYYRCTHKNVQGCMATKQVQRSNEDPTVFEITYREKHTCTMASNAVENSRPQENQEPNLGTGLQQQNGHQNLEQQSNDLLLNLRADLRVLTEQPFASIHFPSTSNIKTEEQVNFPAAMIDNNFAEEFNYPSYVSPYVSPTTSGTSYFSVSPSGGDSFGGHPNLSSSGSEINMISATISAANSPTVASDFRFDQFELGGENFTFDITRFS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1469 359 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1469 359 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1469 359 MobiDBLite consensus disorder prediction 90 105 - -
Dod08g1469 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 356 - -
Dod08g1469 359 Pfam WRKY DNA -binding domain 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1469 359 Gene3D WRKY domain 113 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1469 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 356 IPR044810 GO:0003700
Dod08g1469 359 MobiDBLite consensus disorder prediction 79 112 - -
Dod08g1469 359 MobiDBLite consensus disorder prediction 195 215 - -
Dod08g1469 359 ProSiteProfiles WRKY domain profile. 124 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1469 Dod-Chr8 30220098 30222520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1469 1 242 WRKY Transcription Factor Family AT4G23810 38.113 2.84e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1469 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1469 - - gmx:100776906 377.867