Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1462 ATGGAATGCAACAAAGACGAGGCAGCTAGGGCCAAAGCAATAGCCGAGAGGAAATTATCTGAAAGGGAGTATGCTGGTGCAAAAAAGTTTGCTCTCAAAGCTCTAAATTTGTATCCTACACTGGAGGGTATTTCCCAGTTTTTGACAACACTAGATGTTTATATATCTGCTGAGAATAAAATAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTTAATCCCTTCGCTGATGATGAGACAATTAGAAAGCAGTACAGGAAGCTGGCTCTCACGCTTCATCCTGACAAAAACAAATCTCAAGGTGCAGAAGGTGCATTTAAGCTGGTTTCAGAGGCGTGGGGTTTGCTATCAGATAAGGCCATGAGACTAGCATATAACCAGAAGAGGAGTTCAAAGGGATTTCAGCATAATGCTCCCAACCATGTCGGGTCACAACCAGAAGCACCCAGTTCAAATGGTTGTTATAATCTTAACAAGAATGCAGCTTCAAATGTGAGAACCAGTAATAATAATGCTCGGGCACCTTCAAACTTGGTTCCTCCTCCATATACAACGTCTGGTACCTTTTGGACCATCTGTAATCGCTGCAGGACACATTTTGAGTATCTAAGGATTTATTTGAATCATACCCTTCTATGTCCTAACTGTAATGAGGCATTTGTAGCTGTAGAGAAGGGTCCACCCCCCAGTGTTCTTAAGTCATCTAATTGGTCTTCTCAGCAACATCATCAAAATTCTCATCCTCACGCTGGAAGGAATAACCCCACTAATCAAGGAAGAACTCATGCAGTTTCTCAAAACTCAGAACCCAGCTATTATTCGGGAGCGTCTTCTTTTAATAACACTAACTTCCAGTGGGGACGATTTTCAAGAATGGCTGGTTTTGGTAGCATAGGTGGGTCATCATCTAATATTGCTGCATCTATTAAGCAGCCGACAGGTGAGAAAGCCACAAGAGAATGTGAGGGAGGGCCTTCGGTTGCTGCATGGGAGAGGAGTCAAATGTGCAAGAGGTCTAATGGTTCTTTTAATAATTTTGAAAATCCTGCGAAGAAAATGAGGGCAGATGACATTCACATGTACATGCCAAGTCACATGACCATGGGAATGGAAAGGAAATATTCCTTTCCAGGTTTTTCTAGCAAGCATAACAGCGTGAGAGAGTTGTCAATGTTTGAATTGCGAAACTTGTTGATCAATAAAGCACACATTGAAATTCACAAGAAACTTAAAGAATGGAGATCATTGGCTGATGCTAAGATCACAAACAAGGACAAAGGACATAAGAGACAAAAAGGCACATTTTATGAGAAAACAAGTTGTCCAAGGAAGCATGGACGTTCCACTATTAATGGTAGTGGGCATCCTGACAGTGATTCTGTCCCTGTCGCTTCTGGTGGTACTGTAAATGAGAACAAAGCCTGCATTACAATCAATGTTCCTGATTCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCCTTTGAGGAGGACCAGGTGTGGGCGGCCTATGATGATGATGATGGAATGCCACGATATTATGCTAAAGTTCACAAGGTGCTTTCCATGAAGCCGTTTAGATTGCGGATAAGTTGGCTTAACTCTCGAAGCAACAGTGAATTAGGCCCAATAGACTGGATAGGTTCTGGATTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAATAACTGAGTCATTAAATTCATTTTCTCATAAAGTTATGTGGACAAAAGGAACTAGGGGAGTTGTTCGCATCTTTCCCAGAAGTGGGGATGTCTGGGCTCTTTATAGAAACTGGTCTCCAGATTGGAATGAAAACACTCCTGATGAAGTGATACACAAATATGATATGGTCGAGGTGCTTGAAGATTTCAATGAGGATGAAGGTGTATTAGTTACACCACTTCTTAAGGTTGATGGTTTTAGGACAGTGTTTCACAGGCACAGTCATGTTCAGGCAAGGAAGATTCCCAAAGCAGAGATGTTTCGCTTCTCTCATCAGGTTCCTTATTACTTGCTTACTGGACAAGAAGCTCATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTGTAGACCTCCAGACAATCACTGAAACTAAAGAGGCATCGGACAATGTTGAAAAATCGAAAGACACACTGCCCTATTCACTTGAGAAACATTCCTGTGGTGAAGGGAGAGAATGCCTAAAAGCCTTGTAG 2229 0.4186 MECNKDEAARAKAIAERKLSEREYAGAKKFALKALNLYPTLEGISQFLTTLDVYISAENKISGEMDWYGILGVNPFADDETIRKQYRKLALTLHPDKNKSQGAEGAFKLVSEAWGLLSDKAMRLAYNQKRSSKGFQHNAPNHVGSQPEAPSSNGCYNLNKNAASNVRTSNNNARAPSNLVPPPYTTSGTFWTICNRCRTHFEYLRIYLNHTLLCPNCNEAFVAVEKGPPPSVLKSSNWSSQQHHQNSHPHAGRNNPTNQGRTHAVSQNSEPSYYSGASSFNNTNFQWGRFSRMAGFGSIGGSSSNIAASIKQPTGEKATRECEGGPSVAAWERSQMCKRSNGSFNNFENPAKKMRADDIHMYMPSHMTMGMERKYSFPGFSSKHNSVRELSMFELRNLLINKAHIEIHKKLKEWRSLADAKITNKDKGHKRQKGTFYEKTSCPRKHGRSTINGSGHPDSDSVPVASGGTVNENKACITINVPDSDFHNFDLDRAENSFEEDQVWAAYDDDDGMPRYYAKVHKVLSMKPFRLRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGKHEITESLNSFSHKVMWTKGTRGVVRIFPRSGDVWALYRNWSPDWNENTPDEVIHKYDMVEVLEDFNEDEGVLVTPLLKVDGFRTVFHRHSHVQARKIPKAEMFRFSHQVPYYLLTGQEAHNAPKGCRELDPAATPVDLQTITETKEASDNVEKSKDTLPYSLEKHSCGEGRECLKAL* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1462 742 MobiDBLite consensus disorder prediction 446 467 - -
Dod08g1462 742 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Dod08g1462 742 PANTHER HEAT SHOCK PROTEIN-LIKE 1 720 - -
Dod08g1462 742 Pfam Domain of unknown function (DUF3444) 478 683 IPR024593 -
Dod08g1462 742 MobiDBLite consensus disorder prediction 440 467 - -
Dod08g1462 742 MobiDBLite consensus disorder prediction 133 160 - -
Dod08g1462 742 PANTHER BNAC03G44070D PROTEIN 1 720 - -
Dod08g1462 742 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Dod08g1462 742 CDD DnaJ 66 119 IPR001623 -
Dod08g1462 742 MobiDBLite consensus disorder prediction 232 273 - -
Dod08g1462 742 MobiDBLite consensus disorder prediction 229 273 - -
Dod08g1462 742 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dod08g1462 742 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dod08g1462 742 PRINTS DnaJ domain signature 102 122 IPR001623 -
Dod08g1462 742 Gene3D DnaJ domain 63 173 IPR036869 -
Dod08g1462 742 SMART dnaj_3 65 122 IPR001623 -
Dod08g1462 742 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1462 Dod-Chr8 29379467 29382096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1462 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.479 1.33e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1462 - - gmx:100792212 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1462 08 29379467 29382096 Dod08g1462 08 29379467 29382096 ECH