Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1461 ATGGTATGCATCGGTTACGCAAGGTCTTTGGTTGTTCAAGCTGGAACCTTCGCCAAGAGAGTGAGAATAAACGGAATTGGGAGGAGTTTGCAAGCTGTTCCCAGCATTTCTTATTGGCCTACTCGCGAATTTAAGACAATAACAGTGATGATGGTTGATACGGGTTCTGTGTCAAGAAGGGCTGGACCCCTTGTTGATATGATGCCAGAGAAAGATGATGATGGTCGGTTTGCCAGCGGAGGGTGGAAAAGTGAGGATGGAAGGCTTAGCTGTGGGTATTCAAGTTTTAGAGGGAAGAGAGTGACAATGGAGGATTTTTACGACATTAAGACAATGAAGATTGCTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGCGGTTCCCGTGCTGCGGAGTATTTGAAAGAGCATCTATTTGATAATCTCTTGAAGCATCCAATGTTTTTGTCTGATGCCAAATTGGCTATAAGTGAAACGTATCAGCAGACTGATGCTGATTTTCTGGATTCTGAAAAGGATACCTTCCGGGACGATGGTTCTACTGCTTCAACAGCAGTTTTGGTTGATAAACATCTTTATGTAGCTAATGTTGGAGATTCTAGGACTATAATATCGAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAACAGAAGCGATGAGCGGAAGAGAATTGAGAATGCCGGGGGTGTTGTTATGTGGGCAGGTACTTGGAGGGTAGGGGGTGTGCTAGCAATGTCTCGTGCCTTTGGTAATCGTATGTTGAAGCAGTTTGTTGTTGCAGAACCTGAGATCCAGGACCAGGAGGTAGATGAACAAACTGAACTGCTTATTCTTGCAAGTGATGGACTGTGGGATGTAGTACCAAATGACGATGCTGTTTCTCTCGCTCGCACAGAAGAGGAGCCAGAGGCAGCTGCTCGTAAGTTAACCGAAGCCGCTTTTGCTCGAGGTAGTGCAGATAACATTACATGTATCGTGGTGCGCTTCCACCATGACAAAGCAGACCCTGGCGTTCCTGACAAAACAGCATCACCCAGTGTCCAGCAAGAGTAG 1074 0.4544 MVCIGYARSLVVQAGTFAKRVRINGIGRSLQAVPSISYWPTREFKTITVMMVDTGSVSRRAGPLVDMMPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTMKIAGHSVCLFGIFDGHGGSRAAEYLKEHLFDNLLKHPMFLSDAKLAISETYQQTDADFLDSEKDTFRDDGSTASTAVLVDKHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEVDEQTELLILASDGLWDVVPNDDAVSLARTEEEPEAAARKLTEAAFARGSADNITCIVVRFHHDKADPGVPDKTASPSVQQE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1461 357 ProSiteProfiles PPM-type phosphatase domain profile. 90 336 IPR001932 -
Dod08g1461 357 SMART PP2C_SIG_2 88 336 IPR001932 -
Dod08g1461 357 Pfam Protein phosphatase 2C 92 329 IPR001932 -
Dod08g1461 357 SMART PP2C_4 80 334 IPR001932 -
Dod08g1461 357 Gene3D - 81 354 IPR036457 -
Dod08g1461 357 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 43 343 - -
Dod08g1461 357 PANTHER ALPHABET, ISOFORM E-RELATED 43 343 - -
Dod08g1461 357 SUPERFAMILY PP2C-like 86 337 IPR036457 -
Dod08g1461 357 CDD PP2Cc 90 336 IPR001932 -
Dod08g1461 357 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1461 Dod-Chr8 29335615 29342822 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1461 1 342 PP2C-type Phosphatase Gene Family AT5G53140 69.188 4.80e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1461 K17506 - gmx:100805795 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1461 08 29335615 29342822 Dod08g1461 08 29335615 29342822 ECH