Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1459 ATGAAGAACCACGAACCCCACTCGCCTCCGAGAATCACTCTCCGGCGAGTGGGCAGCGACTCCGACAACACCTTGACGAGGTTCAAGAATGCTAGGAGGAGGAGGCTCAGAATCCGGCGATTGAAGTACACGTGCGAGGCCAAGATTACCGTTGGAAATGGCGATTCTCCGGTGGAGACGAAGGCCGTCGATTCTGAGAATAATCGGAGAGAGATTCACGAGTCCATGGAGATATCGCTGTCGCTGGCGTCGACGTCTTCGGAGGAAGAGGATCGGTCGTCGTTGTTTGAGCAAAACGGCGCCGTTTTGTCGTACGGTTCGGTCTCGGTGATAGGGAGCAGGAAGGAGATGGAGGACGCTGTGAGCGTGGAGATAGGGTTCACTGGGAAGGAGAATGATTCGAAATGTGACTTCTTTGCGGTCTTCGACGGCCACGGCGGAGCTCAGGTGGCGGATGCGTGCCGCGATCGGATGCACCTGGTGATGGCGGAGGAGGTGGAGAGGAGGAGGAGGACGAGCAGAAGCGGAAACGATGAGGTGGTGGAGTGGGACTGGGAGGGAGTGATGGAAGGGTGTTTTCGTAAAATGGACGGAGAGGTGGCGGATAATGCGGCGGTCAGGACGGTGGGTTCCACGGCGGTTGTCGCCGTCGTGGCCTCGGAGGAAGTCGTCGTTGCTAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGGAGGTGAGGCCGTCGAATTGTCTAGTGATCATAAGCCCGATAGGCCTGATGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTAATAAACTGGAATGGACAGCGCGTTCTAGGTGTTATTGCCACTTCGCGATCTATAGGAGACCAGTACCTTCGGCCATATGTAATTTCGAAACCAGAAGTCACGGTGACCAAGCGAACCAGCAATGATGAATTTCTTATACTGGCAAGCGATGGCTTGTGGGATGTCATCTCTAGTGAAGCAGCGTGCCAGGTTGTAAGGAAAAGCCTCAACGGCCAGATTAAAAGAGTCTCCAATGGGGTTGGGAGTCGAAGTCGTGCTGCTGAGGCTGCAGCACTCTTGGCTGAGATAGCAATGGCAAAGGGAAGCAAAGATAACACCAGTGTCATAGTAGTCGAGCTAGGAGGAAGAACAGCAACAACATCTAGCTGA 1167 0.5441 MKNHEPHSPPRITLRRVGSDSDNTLTRFKNARRRRLRIRRLKYTCEAKITVGNGDSPVETKAVDSENNRREIHESMEISLSLASTSSEEEDRSSLFEQNGAVLSYGSVSVIGSRKEMEDAVSVEIGFTGKENDSKCDFFAVFDGHGGAQVADACRDRMHLVMAEEVERRRRTSRSGNDEVVEWDWEGVMEGCFRKMDGEVADNAAVRTVGSTAVVAVVASEEVVVANCGDCRAVLGRGGEAVELSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVIATSRSIGDQYLRPYVISKPEVTVTKRTSNDEFLILASDGLWDVISSEAACQVVRKSLNGQIKRVSNGVGSRSRAAEAAALLAEIAMAKGSKDNTSVIVVELGGRTATTSS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1459 388 ProSiteProfiles PPM-type phosphatase domain profile. 104 379 IPR001932 -
Dod08g1459 388 CDD PP2Cc 104 379 IPR001932 -
Dod08g1459 388 PANTHER ALPHABET, ISOFORM E-RELATED 64 380 - -
Dod08g1459 388 MobiDBLite consensus disorder prediction 1 20 - -
Dod08g1459 388 Pfam Protein phosphatase 2C 105 372 IPR001932 -
Dod08g1459 388 Gene3D - 97 385 IPR036457 -
Dod08g1459 388 SMART PP2C_SIG_2 118 379 IPR001932 -
Dod08g1459 388 SMART PP2C_4 93 377 IPR001932 -
Dod08g1459 388 SUPERFAMILY PP2C-like 100 381 IPR036457 -
Dod08g1459 388 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
Dod08g1459 388 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 64 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1459 Dod-Chr8 29083984 29088007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1459 66 379 PP2C-type Phosphatase Gene Family AT2G29380 45.808 3.49e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1459 K14497 - gmx:100807235 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1459 08 29083984 29088007 Dod08g1459 08 29083984 29088007 ECH