Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1453 ATGGAAATGGAGGCCTCCTCCTCCTGCTCCTCCTGTGCGCGCACCGTTCTGTTAATCATTGCAACCATCCTTCTCCTATTCCAACAAACTTGCACCGCTATGCATCACCCACCATGCCCTCCTTCTTCCTGCGGCAACATTCCCAACATAACTTACCCATTTCGGCTCAAAGGTGACCCAAGCCACTGCGGCGACAGAAGGGTCGAACTGGATTGCGAGAACAACGCAACAGTGTTGACTCTGCTCTCAGGGAAATACCATGTGCAAGACATCGACTACAAGAGGCACAGAATCAGGTTGTGTGATGCGGGTGTTGTGGAGGATGCTTCTTGCTCCTTCATCCCTCGCTATCTCTCACACGACCGCAGTTTCAAGTACGACTCTGGATCGGAGCTGTTCACTTTGGAGTTCATGGATTTTTCAAGAATAGGATACTTCAACTGTACCAATCCAGTGACTAATGATCCTGATTACGTTAATGTAGATACCAGTCGTTGTGTCCATCCCGCAGGGCATGTGTATGCGGTAATTGAGCGATCCTGGTATACGAATCAAGTGAACAACGTCAAGGTTGGGTGCAGTCTGATGGCGGCTACGCTGGTAAATTGGACGCAGCTGGGGATCGGAAATGGGAGCGTCTCCTATGATGAAATTCATAGGGTGATGGTTGATGGATTCACCTTGTCGTGGTCACCTATTGTTTGTGAGGATCAATGTGGAAAGGGCACAGATTGCGAGGTCATCAATGAATCCACGGGGGAAGTCCAATGTGGAAGGCGATACTGCCATTACGCCTACCATACAACCACCAAATGCGGAATTTCGCAAATTACTATTGGTTATATTCGAGCTTATCTTAGAGGCATTATAATTGGAATAGGCAGTAGAATAACATTTAGCACAAAAAATTTGGACAATCCAGTTGGGCTACAATATTTTGATGAAGGTGTATCCATAGGACGAAATATTATACCAATAGTAGTGGCATCCAGATATCTGCTTGGAGTCGCACTTCTGCTTGCTCTGTTGATCTATAAATGGCGACGAAGACATTGGTCAATATATGAAAACATTGAGCATTTTCTGCTAGACAGCAATCTCAATCCCATTAGGTATGAATACAAAGATATCAAGAAGATGACCAGTTGTTTCAAAGTGAAATTGGGTAAAGGAGGCTTCGGCTCTGTATACAAGGGAAAGCTTCGCAGTGGACCTGATGTAGCAGTAAAGATGTTGAGCCAATCCAATAAAAGTAATGGACAAGACTTTATTAGTGAAGTAGGCACCATTGGAAGAATACATCACATTAATGTGGTACGTCTTGTTGGATATTGTGTTGAGGGGAAAAAGCATGCTCTGGTGTATGAATTTATGCCTAATGGATCATTGGATAAATACATTTTCTCCAAGGAAGGAAGTGTCCCTTTGAGTTATGGGAAAATATATGAAATATCTCTTGGGGTGGCTCGTGGAATTGCATATCTGCATCAAGGTTGTGAGATGCAAATTCTACATTTTGATATCAAGCCACATAATATTCTTTTAGATGACAACTTTGTCCCAAAGATTTCAGATTTTGGACTTGCAAAGCTATATCCTGTGGAAGATAGCATTGTCCCTTTAACTGCAGCAAGAGGGACCTTAGGCTACATGGCTCCAGAATTGTTCTACAAAAACATTGGGGGAGTATCTTACAAGGCCGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCGAGTAGGAGGAGAAACTCGGATCCTCAAGCGGAGCATTCAAGCCAGTTTTACTTCCCATTTTGGGTATATGATCAACTTTATGAAGTGAATGATATTGACTTGGAAGATGCCTCAGAGGAGGAAAAGATTCTTGTAAAAAAGATGTTCATAGTTGCACTTTGGTGTATACAGTTAAAGCCCAGTGATCGCCCATCAATGAACAAGGCAGTAGAGATGCTTGAAGATAAAATTGAAAGCCTTGAAATGCCTCCAAAGCCTTCTTTCTATCCGCAGGAAACATACACACATGTTGAAGATGGAATCAACTCTGACCAAACATCGTGGACTGATTCAACTGGTACAAGTTGTCTAAGCGAGGCCCTAAGTAATCATCCACTTGAGGATGACGCTTGA 2133 0.4323 MEMEASSSCSSCARTVLLIIATILLLFQQTCTAMHHPPCPPSSCGNIPNITYPFRLKGDPSHCGDRRVELDCENNATVLTLLSGKYHVQDIDYKRHRIRLCDAGVVEDASCSFIPRYLSHDRSFKYDSGSELFTLEFMDFSRIGYFNCTNPVTNDPDYVNVDTSRCVHPAGHVYAVIERSWYTNQVNNVKVGCSLMAATLVNWTQLGIGNGSVSYDEIHRVMVDGFTLSWSPIVCEDQCGKGTDCEVINESTGEVQCGRRYCHYAYHTTTKCGISQITIGYIRAYLRGIIIGIGSRITFSTKNLDNPVGLQYFDEGVSIGRNIIPIVVASRYLLGVALLLALLIYKWRRRHWSIYENIEHFLLDSNLNPIRYEYKDIKKMTSCFKVKLGKGGFGSVYKGKLRSGPDVAVKMLSQSNKSNGQDFISEVGTIGRIHHINVVRLVGYCVEGKKHALVYEFMPNGSLDKYIFSKEGSVPLSYGKIYEISLGVARGIAYLHQGCEMQILHFDIKPHNILLDDNFVPKISDFGLAKLYPVEDSIVPLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNSDPQAEHSSQFYFPFWVYDQLYEVNDIDLEDASEEEKILVKKMFIVALWCIQLKPSDRPSMNKAVEMLEDKIESLEMPPKPSFYPQETYTHVEDGINSDQTSWTDSTGTSCLSEALSNHPLEDDA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1453 710 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1453 710 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 685 - -
Dod08g1453 710 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Dod08g1453 710 MobiDBLite consensus disorder prediction 679 701 - -
Dod08g1453 710 Gene3D Transferase(Phosphotransferase) domain 1 458 663 - -
Dod08g1453 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Dod08g1453 710 MobiDBLite consensus disorder prediction 679 710 - -
Dod08g1453 710 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Dod08g1453 710 CDD STKc_IRAK 388 654 - -
Dod08g1453 710 SMART serkin_6 382 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1453 710 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 685 IPR045874 GO:0004672
Dod08g1453 710 Pfam Protein kinase domain 386 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1453 710 SUPERFAMILY Protein kinase-like (PK-like) 368 654 IPR011009 -
Dod08g1453 710 Gene3D Phosphorylase Kinase; domain 1 365 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1453 Dod-Chr8 28841846 28847844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1453 39 669 Receptor kinase-like Gene Family AT5G38260 34.165 4.09e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dod08g1453 Pkinase 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1453 - - gmx:100820366 974.156