Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1434 ATGGAAAAATTTGGATCGCTTGGACCTACCGACCCAGGTGGCTCCTCCCGGCGCTCCACCGCTCCACTCACCGAATCATCCTCCGCCTCCTCTTCCTCACGAAGCAAGAAGAAGCTCATCATGCTCTCCGTTCTTGCCGCCGTACTAATCATTGCCTCAGCCGTCTCCGCCGCTGTCGTCACCGTCATTCGCTCCCGCGTCTCGGCGGGGAACCAAAACTCGCCGAACCTCCGCCGTGAACCGACCCAGGCAATATCCAAGACCTGCAGCAAGACCCAGTTCCCCACCCTCTGCATAAACACCCTCCTCGACTTCCCGGGCTCCACCACCGCATCCGAGAAGGACCTCGTCCACATCTCCTTCAACATGACCCTCCGCCACCTCAGCAGCGCCTTCTACGCCTCCACCGGCATCCCCTTCAGCAGCGACGCGGACTCTCGAGTCCGCGCCGCCTACAACGACTGCCTCGAGCTTCTCGAGGATTCTGTAAACGCGCTCGAGCTGTCGCTGGCCTCAGTCGCGCCGCCATCCGATGGCGGCCGGGCTATCAGACCCGCCGCCGTGGGATCGAACGATGACGTGCTGACGTGGGTCAGCGCCGCTCTGACTAACCAGGACACGTGCTCGGAGGGGCTGGAGGACACGAAGGGGCCCCTGAAAGACCAGATGGTTAATAATTTGAAGGACTTGTCGGAACTCGTGAGCAACTGTCTCGCGATATTCTCGGCCAGCGGGAGCGGTGACTTTTCCGGGGTACCAATACAGAACAGGAGACGATTGATGGAAACGGGAGAGAATGCTAATAATTTCGATGTCTCCGGGAATCGTTTCCCGAGATGGTTAAGCAAAAGAGATAGGAGATTGTTGAGTTTGCCAGTGTCGGCAATACAAGCAGATATAATCGTGTCTAAGAACGGTAACGGAACAGTGAAGTCAATATCGGAGGCAATTAAGAAGGCGCCAGATAAGAGTAACCGCCGGTTCATAATATACATCAGGAAAGGAAGGTATGAGGAGAATAATTTAAAGGTTGGGAGAAAGAAAACCAATCTAATGGTCATCGGGGATGGAAAGGGCAAAACCGTCATCACAGGTAGCAAAAATGTTGTGGATGGCATGACAACGTTCCATACCGCATCCTTCGCTGCTAGCGGCGCCGGTTTCATTGCACGAGACATCGCGTTCGAGAACTATGCCGGACCAGAGAAGCACCAGGCTGTTGCGCTCCGTGTCGGAGCAGACCACGCGGTGGTGTACCGTTGTAGCATCATGGGGTACCAGGACTCATGCTACGTGCACTCCAACCGTCAGTTCTTTCGCGAATGCGACATTTACGGCACCGTAGATTTCATATTCGGCAACGCCGCAGTGGTCTTCCAAAAGTGCAACCTTTATGCCAGAAAGCCAATGGCCCAACAGAAAAACACCATCACCGCCCAAAACAGGAAGGACCCCAATCAGAACACGGGTATATCCATCCATGACTGTCGAATCCTACCCGCCCCGGATCTTGTGCCATTGAAGGGCAGCGTCCCGACCTATCTGGGCCGTCCATGGAAATTGTACTCTAGAACGGTGTACATGTTATCTTACATGGGTGATCACATACATCCTCGTGGATGGTTGGAGTGGAATGGGAACTTTGCATTGGACACATTGTATTATGGTGAGTACATGAATTATGGGCCGGGTGCAGCCGTGGGTCAACGTGTTAAATGGCCGGGGTATCGGGTCATCACTTCCACAGTTGAGGCTAACAGATTCACGGTGGGTAAATTCATATCAGGTTCGGCATGGTTGCCATCCACCGGAGTGGCGTTTTTGGCCGGGTTGTCCACCTGA 1842 0.544 MEKFGSLGPTDPGGSSRRSTAPLTESSSASSSSRSKKKLIMLSVLAAVLIIASAVSAAVVTVIRSRVSAGNQNSPNLRREPTQAISKTCSKTQFPTLCINTLLDFPGSTTASEKDLVHISFNMTLRHLSSAFYASTGIPFSSDADSRVRAAYNDCLELLEDSVNALELSLASVAPPSDGGRAIRPAAVGSNDDVLTWVSAALTNQDTCSEGLEDTKGPLKDQMVNNLKDLSELVSNCLAIFSASGSGDFSGVPIQNRRRLMETGENANNFDVSGNRFPRWLSKRDRRLLSLPVSAIQADIIVSKNGNGTVKSISEAIKKAPDKSNRRFIIYIRKGRYEENNLKVGRKKTNLMVIGDGKGKTVITGSKNVVDGMTTFHTASFAASGAGFIARDIAFENYAGPEKHQAVALRVGADHAVVYRCSIMGYQDSCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNLYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRILPAPDLVPLKGSVPTYLGRPWKLYSRTVYMLSYMGDHIHPRGWLEWNGNFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANRFTVGKFISGSAWLPSTGVAFLAGLST* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1434 613 Gene3D - 293 611 IPR012334 -
Dod08g1434 613 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 242 IPR035513 -
Dod08g1434 613 MobiDBLite consensus disorder prediction 1 30 - -
Dod08g1434 613 ProSitePatterns Pectinesterase signature 2. 444 453 IPR033131 -
Dod08g1434 613 SMART PMEI_2 80 240 IPR006501 GO:0004857
Dod08g1434 613 CDD PMEI-like_3 89 243 - -
Dod08g1434 613 Pfam Plant invertase/pectin methylesterase inhibitor 84 240 IPR006501 GO:0004857
Dod08g1434 613 PANTHER PECTINESTERASE 27 611 - -
Dod08g1434 613 TIGRFAM PME_inhib: pectinesterase inhibitor domain 72 241 IPR006501 GO:0004857
Dod08g1434 613 Pfam Pectinesterase 299 596 IPR000070 GO:0030599|GO:0042545
Dod08g1434 613 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 244 IPR035513 -
Dod08g1434 613 SUPERFAMILY Pectin lyase-like 294 610 IPR011050 -
Dod08g1434 613 MobiDBLite consensus disorder prediction 12 30 - -
Dod08g1434 613 PANTHER PECTINESTERASE 27 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1434 Dod-Chr8 27236600 27242056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1434 4 612 Carbohydrate Esterase AT5G53370 61.928 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1434 - - gmx:106796002 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1434 08 27236600 27242056 Dod09g1757 09 39221048 39222725 PCT
Dod09g0992 09 30236041 30238746 Dod08g1434 08 27236600 27242056 PCT