Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1424 ATGAGAATGCTGCCAGCGGCCTCTACCGGTGAAGCACGAGAGGGCGGCTCCGGCGGCCGCACGGTGGTTGTCGGAGTGAAGTTGGACTCTATCAGCAGAGAGCTGATCACCTGGGCTTTGGTCAAGGTCGCTCAGCCCGGTGATGTTGTCGTTGCTATTCATGTTCTTGGCAACGACGAAATTGTGAATAGAGAGGGGAAATCGACTCTGTTTTCGGTTGTCAAAGCGTTTGACACTGTTCTTGCCGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGATCTCAAGCTCAAGATTTGCCGGGGCTCGTCAGTGAGGAAAATTCTGGTTAGAGAAGGAAATGCATATTCTGCAACCCATGTTATAGTTGGAACTCCTCAAGGTCTTCATAAAATCCGGCCATCTATTTCTGTAGCTAAGTACTGTGCTAAGAAGTTGTCCAAGGATTGCTGGGTACTTGCTGTTAACAATGGGAGAGTTGCGTTCAAGAGAGATGGCTTGCCAGCTACTCGTTCTGATTTGAAAGGAATTGATCGGGATCACAGAATTGGTTTGCTTGGTTCGATTCACCGTACACTCAACAAGAGCTCAAACGTACTAAATGATGACAGCACAGGGACGCATGACAAGGTCTGTGGCCAAATTTCAGACCACAGCTTAGCTAAGATTTTTCTGGATTCTACCGAAGTTGTTGGAAAGAGAAAGAGCTGCTCAAGTTGTGCTCCAACCCAGAGATTGCCAGGTTCATCTTGCCTTGGCCACCAATCTGCAGAAGAGTCTTCCGGTGGTGGTGTTAAGAACTCTTTGGCAATAGTGCCTGTACAGACGACTGATGCAGATTCTAGCACAAGAAGGTTGCATATCAGAGAACTACCTGAATTGAAAGCTGGTTGGCCACTATTACACAGAGCAATTTTATCAGACAGGCAATCTACTAAAAGATCAATATTGTGCCAGATCTCTGTGGTCCAGTGGGCAATGCGGCTTCCCTGTAGGAATCTTTCATATGCTCCAGATCATGACAGCAAAACAAACAATTATGACCTATACCAAGGTCAATCTCTGGCTTTGGACAGTAGAAGTGGTGTGATTGTTCCAGTGGATGCTGAAATCGGGACTGCTTCTTCTCCCAAATGCAATTCAAGAACTATTCCTAAAGAATTAGAGGGCCTTCATGAGAAATACTCATTAACTTGCAGGTTGTTTGAGTACCAAGAACTTATATCAGCAACATCAAACTTCTTGCCTGAGAATTTAATTGGGAAAGGAGGAAGTAGTCAGGTTTACAGAGGCTCTCTTCCTGATGGCAAGGAACTTGCTGTTAAGATCTTAAAGCCTTCTGATGATGTTCTGAAGGAGTTTGTTCTAGAAATAGAAATCATCACTACTTTGCATCACAAAAACATTATTTCCCTCCTTGGATTCTGCTTTGAGGATGGCAATCTTCTGTTGGTGTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGTAACAAGAAAAGTCCTCTTGTGTTTGGTTGGACTGAGAGATATAAGGTGGCAATGGGTATTGCTGAGGCATTGGAGTATCTGCATAATAATGATGGCCAACCTGTGATTCATAGAGATGTAAAATCATCAAATGTATTATTGTCTGAGGATTTTGAACCTCAGCTCTCTGATTTTGGACTTGCTAACTGGGCATCGACCTCATCATCACATATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACATGGCTCCTGAGTACTTCATGTATGGGAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTGGTGCTCCTTGAGCTTCTTTCAGGGAGAAAGCCCATATGTGGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCACTTCTAAATTGTGGGAAGGTGTCACAATTATTAGATCCTAGTTTGGGTGACAACTATGACCATGAAGAGATGGAAAGGATGGTCTTAGCAGCCACACTTTGTATCAGACGTGCTCCAAGAACTAGGCCTCAAATGAGCCTTATCTCAAAGCTCCTTCAAGGTGATGCTGATGCAGTCAAGTGGGGAAGGCTAGAAATTAATGCTGTGGAAGCACCAGAAATGCTTGATGATGTAGCTTGTCCACCTTCCAATCTACAGTCACATCTTAATCTTGCGCTGCTTGATGTGGAGGATGACTCGCTCTCCATGTGCAGTGTTGAGCAGAATGTCTCATTGGAGGACTACTTGCGAGGCAGGTGGAGCCGCTCATCAAGCTTTGACTGA 2283 0.4442 MRMLPAASTGEAREGGSGGRTVVVGVKLDSISRELITWALVKVAQPGDVVVAIHVLGNDEIVNREGKSTLFSVVKAFDTVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREGNAYSATHVIVGTPQGLHKIRPSISVAKYCAKKLSKDCWVLAVNNGRVAFKRDGLPATRSDLKGIDRDHRIGLLGSIHRTLNKSSNVLNDDSTGTHDKVCGQISDHSLAKIFLDSTEVVGKRKSCSSCAPTQRLPGSSCLGHQSAEESSGGGVKNSLAIVPVQTTDADSSTRRLHIRELPELKAGWPLLHRAILSDRQSTKRSILCQISVVQWAMRLPCRNLSYAPDHDSKTNNYDLYQGQSLALDSRSGVIVPVDAEIGTASSPKCNSRTIPKELEGLHEKYSLTCRLFEYQELISATSNFLPENLIGKGGSSQVYRGSLPDGKELAVKILKPSDDVLKEFVLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLSRGSLEENLHGNKKSPLVFGWTERYKVAMGIAEALEYLHNNDGQPVIHRDVKSSNVLLSEDFEPQLSDFGLANWASTSSSHITCTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPICGDYPKGQESLVMWASPLLNCGKVSQLLDPSLGDNYDHEEMERMVLAATLCIRRAPRTRPQMSLISKLLQGDADAVKWGRLEINAVEAPEMLDDVACPPSNLQSHLNLALLDVEDDSLSMCSVEQNVSLEDYLRGRWSRSSSFD* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1424 760 Gene3D Transferase(Phosphotransferase) domain 1 489 695 - -
Dod08g1424 760 SUPERFAMILY Protein kinase-like (PK-like) 395 685 IPR011009 -
Dod08g1424 760 SMART serkin_6 414 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1424 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Dod08g1424 760 ProSiteProfiles Protein kinase domain profile. 414 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1424 760 Gene3D Phosphorylase Kinase; domain 1 379 488 - -
Dod08g1424 760 ProSitePatterns Protein kinases ATP-binding region signature. 420 442 IPR017441 GO:0005524
Dod08g1424 760 Pfam Protein kinase domain 418 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1424 760 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 11 754 - -
Dod08g1424 760 CDD USP_Like 21 152 - -
Dod08g1424 760 PANTHER OS01G0253100 PROTEIN 11 754 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1424 Dod-Chr8 26010216 26014538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1424 401 684 Trihelix Transcription Factor Family AT1G68690 46.367 2.43e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod08g1424 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1424 - - aprc:113846853 1211.05