Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1412 ATGGATCAACACCACTCCCACTTCGTTCACCACCACAACCACCACCACCACCACAATCACCACCAACGCACGAGGTACGCTCCTCTCCCTCCTCGTCCTCCTCATCATCACCACCACCACCAACAACAGGTCCCTCTGCCGCCTCGTCCGTCACCCTCCCTTCCCCCTCCTCCGCCCCCTCCTCCCCAACCCCAACCCCTGTCCTACCGCCCCATCCGCACACTTCCTCCCCCTCCCTACAACAACAACAACAACAACAACAACAACCCCCCACCCCACCAATCCCAATTCCCGTTCAACCCTCCCAACTATCCCCACCACCACCGCCCCCTCCAAGAAGAACGCCCAATATCCTTCAACCACATCCACGCCGTTCCCCAATCCCCTCGGATCTCCTCTCGAATAATCCTCCCCGATGATCCACTTCCCCGCCGCAATCTGCCCAATTTCGACCAGGAAACCGCCTGGAACCCGAGCCCCAGGATTGTCCCCGACAATCGACCCCAGAGGAATTACCCTCCCCTCGACCTCGACCGCGAATTGCGCCACCGTCCCACGGATCGCGATACACCGCTCCCGCCGCCCCCGCTGATTCGATATGATCCCGAGGGTGGGGGCTTGAGGCTGAGAATGGAGTACAAAGGAAACCCTAGGGAGGAGGTGTTCAGGTGGGGTCGGGGCGGCGGCGACGCAAACTACCACCACCACCACCGCCGTGCTGGGGATTTGGCACCGAGTCTCGACTCGCCCAACGGACGCTTCGGCTTGGCGCCGGTGATGTCAAGGGAGATTGGTGTTGTTGATTCGAAACCTGGGGGCTATGTTCGTGTGCATGATGCGGAATTCGAGGGTGAAGTTTTTAGGGGTGAAAGAAGAGATGGGCATGGTGAGAGCAAGAGGTGGGTGAATGAGAGGAAGGGACCTAGGGAGTTGCTTGATTCGCCTTTTGAATTGGGAGACAATAATATTGGTTCTGCTGGGAATGGCGATGATTTTCGGATGGTGTCATCTTCGTCTGCAAAACGGGAGTATTATGGTTCGGAATTGGGTAGATACAGTGGTAGAGGGAACAGCAGGGAGTGTGGTCATGAATTTTCGCGCACTCCCCCAAAGAAACAGATTCAGAAGAAGAGTGCTCTTCTTAGGATTCAGACAGTAAAACCAAGTTACAGGAACCGTGAGATTGAACAATCACGATATGCTGGCTATGCTGCTGACTCTAATTTCTTCAGGGGTAAGGAGCAGCACGGGTATGTAGGTCACGGGTTGAAAGCAGAAGAAAAGGAAGGAAGTCCTGTTGAGCTTGATATCTCTTTTGAATCGAATTCATTGGTGGCCAAGGCTATTGTGGCGCCTTCAAATTCGGCTGTTGTTTCTGATACAAATATGACTTCAGTTTCTGATACAGATTTGACTTCCTCAGAAGACAGAAAGAAGGCTTTGGTATCAGACAGTGATTGCTCTGGTTTGAAACCAGCTAGAGTATGTACTGGTGCTGTAAATTTGAATAGCTCCTCTTGCAAAGCAAATGATTCCTCTAGTTGTGTCAAGGACTTGAGTTTACAGAAGAATGTCCTTGACTCTGGTTCTCAACCTTGCACAAGTGTGACTGGTAATTCTCCTGGGAAAAATGAGGTTGTGCTTTCAGATGAGAATACCAAAATTTGTTCTGGTAAATCCTCCCCAAGGGTTGTCAAGAAGAAAAAAATTGTTAAGAGAGTGGTCAAGAAAGTTGTTGTAAATCCTAATTCAACTGCTTCAAATTCGCAATCAGCAAATATGGTTCATGGATCTGTGCAAGCAGATAGTGTCACTCTTGGTTCATCAACTATCTCTGAACCTGACAAAGTTAAGCCTTATTTTAAGCAGGAAAACATCACTCTTGACAAGGTGTCCTTGCCTGACAGTTTATACAATTTACCAAAGGAAGGGAATGTGTTTCCTGAAGATAAAAAGGGAGGTTTGTCCCTGCTGAGTTTGGGCCCACATTCTAGGTCACAAGAATGTAAGATTGATGAAGATTCTGATACTGGGAAAGTAGTCAGGTTTGAAAGAGGTCAGAACATTTCAAATTCTACATCTTTTGTTTCTAGTAGTGAAGATAAAAAGAGTGATGCTGATTGTTTAGATGCAGATAAGTCTGTCCATATCATGCTTAGCGTGCCAAATGCTGACGTGGTTGCTAAATCCTTAAATGGAAGTACTGCTGAAATCAATCACACCGATTATGATTTTAAGCAACTATGTCAGAATCAAGAGTCTCTATCACCTGAGAAGTATTCAAATGTTGGATGCCCAGAGAATAGTTTTGTAATAGACGTAGGAGATGGAATGAATTGCAGATCGTTTAGTTCAGCTGACAATATTGTTAACTCAGATCTTATAAATACATGTAATGCTGCCAGTGATAGGGTTGATGGCTTGAATTCCAGTGATCTTACAGGTTCAACAGAGAAGTTTACAGTTACTGACAGTGGCAATAATAGTGTTGTTGGTAAGACACGTGAAAATGAGGACCCAGCTATCACCAAGTATGCAATTCTGGAAGAAAATCCAGATACAGTTATCCCTGTGTCAAGTAGTGTAATGTTTGCATCTTCAAGTTCAGTAAAAACTAGTATTCAAGCTGATCCAGATTTCTTACAAAATACTAGTGTACTGAAGCAGGTTTCTAACAATGGACCAGCTAATTTAGAAGTTGGTACCTATCTTCACCATTCTCATATCCCTGACCATGCTGCAAAGCAGGTGTCTCCTAGTGATGCCACCGTATCCTCTGAGAATTGTGACACTGTAGAAATGTTCCCAAATTCTAATATTTCAGTAGGATTTGGTGAAGGGGATACAAATAAGATGAAAAAGAGGAATATTAGGACTCATTCAAAGATGGAGGGCATTTCCCCAAAACCTGTAAATTCAGTTAGCCTTCCAAATCTGCTCTTGAACGATCCATTTCCTTCGGAAGTCATAGATCAATCTGTTCAAAGCTTAGATTTTAACTCAGAATCCTGCCCAGATGGGGTCATTACTTTACACGGGAAAAGGGGGCTTTTAGAGGCCGAGTTTTTTGTTGGAGATAGTGAGATTGATGATGCAAATAAGGTTTCCCCAGTTTCTAAGAGGGTAAAAGTCTCTACAACTCACCCAAAATTTACTCATTGCCATTCTGAATTCAATGATGCAATTGTGGTTTCCACATCTTGTGCAAAAGTTCCTGTTAGTTTCAGTGATAAACAAACACACAAGGAAGAAGTTGGATTATCAAGCATGGATATTCTGGGTACTGCTCAGTCTAAGCCTTATTCAGAGGATATTACTAAATTATCTGACAATATTTTGGTTGGAGGTTCTTGTGAGGCTATGGATGCTAATAGTGAAACAGTGAGTTCTGAGCATTTGGAATTGAAGCACCCAGACATTGTGCCTAATTCACTTTGTGAGGACTTAGACATTCCAAATGTTCAATTCTCAATGTTGGATGGTGAGCAGAAAGAAAATGGTACTCCAATTGTGTCTATAAATAATACTCAAAGTGACATTTTGGTTGTTGGAAATACTAAGGGAGAAAAGACTGATTTACAGCCTGTTGAAGAAAAACACTGGCATAAAGACTTTGTGCAAGGATCTCTGTCCGCTGATGTGGAATCTAATGATCCCAATGTGAAGGATGATTTAATTCCTCAGCAGAACTTTATGTCCTCTTCTGCCAATGGTGATGGAGTCATTTCCAGTAATTCCAATGGTAAATTGATCGAGGATGCACCTGAATCATTATCAGATATGTGTTCTCAAGAAATGGCATCTGAAGTACCGGATAGAAGCAATTTAGATGGTACAGCATCCCACAAAGAAAACATTTGTAGGGATAAAGAGAATCTGGATGTATCTGCAGTTGAACATGGTTCTGATTTGCCTACTTTCACTTCATCCATACATAATACTACAAAAGTTATGAAATCAGATCATGCAACTGGACATAGCAACCCAATCATAAGGAACTTAATGCCACAGCCATCCCATGTTTCTTCGAAAAATACAACTCAGGGTGTGAAATCATACTTTTCAGAAAATGGTAGCAAATGTGAGCTAGGAGGCATTGCTAAAACTTACAAGGGTCATTCTTTCACCATTTCAAAGACAAAGGCACCCTCCTCTTCAACCCATATATCAAAGCCTCGAACTTGGCATCGTTCAGTTGGTAACTTTCCCACACCTGCAATCAAGCCTTCAATGGGAACATTTTCTTCGAAAAGGCCAATTCTTGAAAAGAAAGGGAACATTCAAAATACCTCTTACATTCGTAAAGGTAACAGTCTTGTAAGGCAACCTACAACAGTTTCTGCTTTACCTCAGATCCCTTCTGCTAATCAGTCACCTTTGATCTTAGATGAATTACCAAAGAGTACCATCTCTGAGAGCAGAATTGATGTGACAGATCAACCAGCCTTCCCAAATACTTCTCAGCAGAGGCAGATAAAAACACCTCCATTGCCGATTGACATCAGATCAGAGGAAAATTTATCATCCCCCCTGGTAGAACCTCCTTCCATTGGTTGCTGTGAAAATGCATCGGTTCCTAGGAAATTGATAGAAACTAATGATGCACCAAACTCTTCTGAAGATAGCCTGAAGCATTACGAAACTCCTCAAACTAGTCCACCTAGTAATGGGGAGAGCCAAGTTGAAGCAAGTGACGGAAACATTTCTTCTTCAAACACCAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTAGCAACTTCAAATTGTTGTGATGTTTCTGTCTCGACTGATGACAAGTCTCAAACAGCCTTCTCTGATGGCTACTACAAGAGGAGCAAAAATCAATTAGTCAGGACCACATTTGAAAGTCATATAAATCAGACAGTTACAGTGCCCAATACCACTGTAGATTCTGATGGGCAAGGATCTTGTAAGGTTCTTTGCAATAGAAGGTTTAGTAAGAGGCGGTCACATAAAGTTGCTGGGAGTTCATGCAAACCTTTAAGAGCCTCATTAGTGTGGACACTCTGTGGCAAAAACTCACTTAAAAATTGCCATGGCTCGTGGCATTATCAAAAGGTTTTACCTCACATATTTCCATGGAAAAGAGCAACGTATTTAAGAAGCTTCATTAATAATTCTGCTTCAAGTTCCAATAGTAGTTCCTCATCTACAGTCAGCAAGAAATTGCTTCTGTTGAGAAAGATGGATACTCTTTACACAAGATCAACCCGTGGGTTTTCTCTTTGGAAATCCAAGGTATTAGGTGTTGGTGGGTCTAGCTTAAAATGGTCCAAATCAATTGAGAAGCACTCAAAGCAAGCTAATGAGGAAGCCACACTTGCTGTTGCTGCCGTAGAGAGGAAAAAGAGGGAGCAGAAAGATGCAGCTTGCATTGGTTCTCAGGCAAAGAGAGAACGGATATTCCGTATTGGTTTAGTTCGCTACAAAATGGATCCTTCCAGGCGGACACTTCAGAGGATTTCAGATGATGAATCCCTGTCCTCTGCCACAGTCCGTTCAGGTTTGCCTGCCAAAAGACCTTACATTCCAAGGAGACTGGTGATTGGAAATGATGAATATGTCCGAATTGGCAATGGTAATCAGCTTATCAGGGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCTAGGCAACGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGATTTGGGAAATGTAACAAGGAGGGCGGGAAATGTCCTTATATTCACGATCCCTCAAAAATTGCTGTCTGTACCAAGTTCCTGAATGGTTTATGTTCTACTGCAAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCACAAACAGAAATTGCCCATATAGACATGTCAATGTGAACCCTAAGGCTTCTATTTGTGAAGGATTTCTTAAGGGTTATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGTTATGTCTGTTCTACTTTTGAAGCAACGGGTACCTGTGCACAAGGAACCAAATGCAAGTTTCATCACCCCAAAAAACAGAAGGGAAAGAAAAGGAAGAGATCGGGAGATCAGAATAATAGTAAAGGGCGTTACTTTGGTTCTGTTCCCATTGATGTTTCTGAACCTGGGATGATGGTGGCTCCAAGGCAACGCGAACAGAAGGATGTCCTTGAAGGAGAACTTTCTGACTACATCAGCCTTGACGTAGATGAAGAAGTTGCAGAAACTGCTGATCAGTCATTAGAGCAAGCATTGGGTGACAGTGATACCTTGGATTTACAGATGTATAATTATGATGAACACATTAAACCAATTCTTATTATGAAAACAAAATGGCGGGAAACTGAAGGCATTTGTTAA 6423 0.4303 MDQHHSHFVHHHNHHHHHNHHQRTRYAPLPPRPPHHHHHHQQQVPLPPRPSPSLPPPPPPPPQPQPLSYRPIRTLPPPPYNNNNNNNNNPPPHQSQFPFNPPNYPHHHRPLQEERPISFNHIHAVPQSPRISSRIILPDDPLPRRNLPNFDQETAWNPSPRIVPDNRPQRNYPPLDLDRELRHRPTDRDTPLPPPPLIRYDPEGGGLRLRMEYKGNPREEVFRWGRGGGDANYHHHHRRAGDLAPSLDSPNGRFGLAPVMSREIGVVDSKPGGYVRVHDAEFEGEVFRGERRDGHGESKRWVNERKGPRELLDSPFELGDNNIGSAGNGDDFRMVSSSSAKREYYGSELGRYSGRGNSRECGHEFSRTPPKKQIQKKSALLRIQTVKPSYRNREIEQSRYAGYAADSNFFRGKEQHGYVGHGLKAEEKEGSPVELDISFESNSLVAKAIVAPSNSAVVSDTNMTSVSDTDLTSSEDRKKALVSDSDCSGLKPARVCTGAVNLNSSSCKANDSSSCVKDLSLQKNVLDSGSQPCTSVTGNSPGKNEVVLSDENTKICSGKSSPRVVKKKKIVKRVVKKVVVNPNSTASNSQSANMVHGSVQADSVTLGSSTISEPDKVKPYFKQENITLDKVSLPDSLYNLPKEGNVFPEDKKGGLSLLSLGPHSRSQECKIDEDSDTGKVVRFERGQNISNSTSFVSSSEDKKSDADCLDADKSVHIMLSVPNADVVAKSLNGSTAEINHTDYDFKQLCQNQESLSPEKYSNVGCPENSFVIDVGDGMNCRSFSSADNIVNSDLINTCNAASDRVDGLNSSDLTGSTEKFTVTDSGNNSVVGKTRENEDPAITKYAILEENPDTVIPVSSSVMFASSSSVKTSIQADPDFLQNTSVLKQVSNNGPANLEVGTYLHHSHIPDHAAKQVSPSDATVSSENCDTVEMFPNSNISVGFGEGDTNKMKKRNIRTHSKMEGISPKPVNSVSLPNLLLNDPFPSEVIDQSVQSLDFNSESCPDGVITLHGKRGLLEAEFFVGDSEIDDANKVSPVSKRVKVSTTHPKFTHCHSEFNDAIVVSTSCAKVPVSFSDKQTHKEEVGLSSMDILGTAQSKPYSEDITKLSDNILVGGSCEAMDANSETVSSEHLELKHPDIVPNSLCEDLDIPNVQFSMLDGEQKENGTPIVSINNTQSDILVVGNTKGEKTDLQPVEEKHWHKDFVQGSLSADVESNDPNVKDDLIPQQNFMSSSANGDGVISSNSNGKLIEDAPESLSDMCSQEMASEVPDRSNLDGTASHKENICRDKENLDVSAVEHGSDLPTFTSSIHNTTKVMKSDHATGHSNPIIRNLMPQPSHVSSKNTTQGVKSYFSENGSKCELGGIAKTYKGHSFTISKTKAPSSSTHISKPRTWHRSVGNFPTPAIKPSMGTFSSKRPILEKKGNIQNTSYIRKGNSLVRQPTTVSALPQIPSANQSPLILDELPKSTISESRIDVTDQPAFPNTSQQRQIKTPPLPIDIRSEENLSSPLVEPPSIGCCENASVPRKLIETNDAPNSSEDSLKHYETPQTSPPSNGESQVEASDGNISSSNTKRIVYIKPKTNQLVATSNCCDVSVSTDDKSQTAFSDGYYKRSKNQLVRTTFESHINQTVTVPNTTVDSDGQGSCKVLCNRRFSKRRSHKVAGSSCKPLRASLVWTLCGKNSLKNCHGSWHYQKVLPHIFPWKRATYLRSFINNSASSSNSSSSSTVSKKLLLLRKMDTLYTRSTRGFSLWKSKVLGVGGSSLKWSKSIEKHSKQANEEATLAVAAVERKKREQKDAACIGSQAKRERIFRIGLVRYKMDPSRRTLQRISDDESLSSATVRSGLPAKRPYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKEGGKCPYIHDPSKIAVCTKFLNGLCSTANCKLTHKVIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCSTFEATGTCAQGTKCKFHHPKKQKGKKRKRSGDQNNSKGRYFGSVPIDVSEPGMMVAPRQREQKDVLEGELSDYISLDVDEEVAETADQSLEQALGDSDTLDLQMYNYDEHIKPILIMKTKWRETEGIC* 2141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1412 2140 MobiDBLite consensus disorder prediction 1479 1502 - -
Dod08g1412 2140 ProSiteProfiles Zinc finger C3H1-type profile. 1901 1930 IPR000571 GO:0046872
Dod08g1412 2140 SMART c3hfinal6 1901 1929 IPR000571 GO:0046872
Dod08g1412 2140 SMART c3hfinal6 1956 1981 IPR000571 GO:0046872
Dod08g1412 2140 SMART c3hfinal6 2010 2032 IPR000571 GO:0046872
Dod08g1412 2140 SMART c3hfinal6 1930 1954 IPR000571 GO:0046872
Dod08g1412 2140 SMART c3hfinal6 1983 2009 IPR000571 GO:0046872
Dod08g1412 2140 Coils Coil 1779 1799 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 2031 2054 - -
Dod08g1412 2140 PANTHER CCCH ZINGC FINGER 426 2131 - -
Dod08g1412 2140 Gene3D - 1983 2045 - -
Dod08g1412 2140 ProSiteProfiles Zinc finger C3H1-type profile. 1956 1982 IPR000571 GO:0046872
Dod08g1412 2140 MobiDBLite consensus disorder prediction 1532 1569 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 172 189 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 1 110 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 79 93 - -
Dod08g1412 2140 ProSiteProfiles Zinc finger C3H1-type profile. 1983 2010 IPR000571 GO:0046872
Dod08g1412 2140 MobiDBLite consensus disorder prediction 1479 1494 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 1378 1416 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 130 203 - -
Dod08g1412 2140 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2011 2032 IPR000571 GO:0046872
Dod08g1412 2140 Gene3D - 1928 1982 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 45 78 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 8 43 - -
Dod08g1412 2140 MobiDBLite consensus disorder prediction 1378 1394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1412 Dod-Chr8 25001549 25010806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod08g1412 zf-CCCH 0.0001 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1412 - - ahf:112706494 2207.56