Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1406 ATGGATAAGCAAGTGGTGCTCCTTCCCCTTCTCCTCCTCCTCCTCCTCCTTACCGTTTTCGTAGCTGGCGCTGCATCTTCGTCGTGTCCCATGGATCTCAGCTACGTTGACACCTTTCCCTGGGACACCTCAACGTGCAGAGAACCAATCGACAGGCAGCACTGCTGCCAAACACTCCTCAGCATCTTTGGCGTGGGGCTTGCCCAACACCTCAAAGACACTTCCTTGTTCCAACTCCCTGACAAAAACACCTCCTCCACTTGCTTATCGGAATTCGGGTCCAAGCTTTCAGCCTTGTCACTCCAGCCATCTTTGGCATCTTCTTGCTTCCCGAGCTCCCAATTCGTCACCAACTCTTCCAACTGTGCAGGCATTGAGACCATCCAAGATTGGAAGCAGAGGGTAGGGATGGTCACCCCGTTAGACACCTCTTGCAGTGGGGACATGAATCCCCAGACTCAGTGCAGTATTTGCACTGATGCTGGCTTCAAAGTCACTGCCCAGCTCAACACTCTAGACCCAAACGCCACAAAGTGTTTCTACTTCTCAATCTTATATGCTGCCGGTGTCGCTAACCAGCTTGGTCCGAAAAATCTGGGCACGGCTTCTTGCATTCTAGGCCTGCCACTGTCTACAAAAGGGTCATCAAACAGAAAGCAAGTGTTGAAATTGGTGTTTGGGATATTGGGTGCTCTTGTTGGGGTTGTTCTTGCTTTGGTACTGATTGTCATTTACAGGAAGTGGGATAGGAGGAGGAGGGAAAATAATTATCACAGGTCAATTGAGAACAGTGTCAGGGCCAGCGTTTTGCCTAACGCGGGTGCGAAATGGTTTCATATATCAGAGCTTGAACGGGCCACGAACAAATTCTCGCAGAAGAATATGATTGGTCAGGGTGGTGATGGGGTTGTGTACAAAGGGACTCTCTCGGATGGCGCTTTGGTTGCGGTGAAGGAAATTTTCGATTTGGAGACCAAAGGGGATGAAGAGTTCTGCTATGAAGTTGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTCCCCTCAGGGGCTGTTGCGTTACAAGTGATAATTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTTATGCCTAATGGCAGCCTCAGTTACCAGTTGTCTATTGCTGGGGCTAACAGGCTGACATGGCCACAAAGGAGGAGCATAGTCCTTGATGTGGCTAAAGGGCTTGCTTATTTGCACTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAAGCTACCAACATACTTCTTGACTCCAAGATGAAAGCAAAAGTTGCAGATTTTGGCTTGGCCAAGCAAGGCAATGAAGGCCAGTCTCATCTCACTACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTGTATGGGCAACTAACAGAGAAAAGTGATGTCTATAGTTTTGGTATTGTGATTCTGGAAATCATGAGTGGAAGGAAAGTGCTGGATACGATGAATTCATCGGTGGTCTTAATCACGGATTGGGCCTGGATGCTTGCGAAATCAGGAAGGACCGAGGAAATTCTCGATCAGTCAATAAGAGGAGAAGGGCCTGAGAAGATCATGGAAAGGTTTGTTCTTGTTGGGATTCTCTGTGCTCATGCAATGGTGGCATTAAGGCCCACTATTGCTGAGGCCGTCAAGATGCTGGAGGGTGACATCGACATTCCCGAGTTACCGGATAGGCCAGTACCACTTGGTCATGAGTCATTTCAATCTTATCTACTGCATGGTTTGCAGAGGAGTGGAAGGTCCACGCCATTTATTTCATCTTATGCAACAAGTATGAGCACAATCTAG 1839 0.4758 MDKQVVLLPLLLLLLLLTVFVAGAASSSCPMDLSYVDTFPWDTSTCREPIDRQHCCQTLLSIFGVGLAQHLKDTSLFQLPDKNTSSTCLSEFGSKLSALSLQPSLASSCFPSSQFVTNSSNCAGIETIQDWKQRVGMVTPLDTSCSGDMNPQTQCSICTDAGFKVTAQLNTLDPNATKCFYFSILYAAGVANQLGPKNLGTASCILGLPLSTKGSSNRKQVLKLVFGILGALVGVVLALVLIVIYRKWDRRRRENNYHRSIENSVRASVLPNAGAKWFHISELERATNKFSQKNMIGQGGDGVVYKGTLSDGALVAVKEIFDLETKGDEEFCYEVEIISKIKHRNLLPLRGCCVTSDNLKGKRRFLVYDFMPNGSLSYQLSIAGANRLTWPQRRSIVLDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTMNSSVVLITDWAWMLAKSGRTEEILDQSIRGEGPEKIMERFVLVGILCAHAMVALRPTIAEAVKMLEGDIDIPELPDRPVPLGHESFQSYLLHGLQRSGRSTPFISSYATSMSTI* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1406 612 Pfam SPARK 25 179 IPR043891 -
Dod08g1406 612 SMART serkin_6 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1406 612 SUPERFAMILY Protein kinase-like (PK-like) 275 581 IPR011009 -
Dod08g1406 612 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Dod08g1406 612 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 591 - -
Dod08g1406 612 Gene3D Phosphorylase Kinase; domain 1 251 370 - -
Dod08g1406 612 ProSiteProfiles Protein kinase domain profile. 290 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1406 612 PANTHER OS01G0253100 PROTEIN 12 591 IPR045271 GO:0004714|GO:0006468
Dod08g1406 612 Gene3D Transferase(Phosphotransferase) domain 1 371 569 - -
Dod08g1406 612 Pfam Protein kinase domain 291 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1406 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Dod08g1406 612 CDD STKc_IRAK 296 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1406 Dod-Chr8 23677542 23679842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1406 21 585 Receptor kinase-like Gene Family AT1G11050 53.675 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Dod08g1406 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1406 - - ccaj:109788171 979.163