Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1390 ATGGGCATGAAGCTGGGCCTCTTATTCATTTTCTCAGCAGCTTTCATGATTGGAGCATTGTTCTCAGGAGTTGAAGCTGAACCAGTGGCAGATAAACAAGCTTTGCTTGATTTCCTTCGCAACATTGATCACTCTCAGCCTCTTAACTGGAATGAGAAGTCTTCTGTATGTAAGAGCTGGACTGGAGTGACCTGTAACACAGACCAATCCCGAGTAATAGCCCTCCGATTACCCAGTGCAGGATTGAGTGGCCCAATCCCACCCAACACTCTTAGCCGTCTCTCGGCACTCCAGACAGTGAGTCTTGTATCAAATAGAATAACTGGTTCTTTTCCTTCAGGTTTCTATGAGGTGAAGAACTTGACCAATCTCTACCTCCAACTTAACAAGTTTTCTGGTCCGCTGCCATCAGATTTTTCAGTTTGGAATAATCTTACTGTAGTAAATTTATCCAACAATTCTTTTAATGGGAGCATCCCTTTTTCTGTTTCAAAGTTGACTCATCTCACTTCTTTAGTCCTAGCCAACAATTCCCTTTCAGGTGAAATTCCTGACCTCAATATTCCTAGCCTGCAAGAGCTAAATTTGGCAAACAATAACCTAAGTGGGTTTGTGCCTAATACCCTTCAGAGATTTCCAAGTTGGGTCTTTTCTGGTAACAATCTTACATCTGCATATGCACTTCCTCCTGATTCTTCTGTGCAACCATCCAATGCTAATCAGACACGGAAACACAAAAGACGCAGAGAAGCTGCATTATTGGGCATCATAATTGGTGTTTGTATGCTGGGATTTGCGTTAGTTGCAACTTTCATGATTGTGTGCTGCTATAGGAAAGGTGGTGGAGATGGACAACTAGTGAGGTCACAGAAAAAAGAATTCTCCCCCAAAGCAGAAGCTTCTTTAAATCGAGACAGAAACAAAATTGTCTTCTTTGAAGGCTGCAATCTTGCATTTGACCTGGAGGACCTGCTGAGAGCATCTTCGGAGGTGCTTGGAAAGGGAACATTTGGTACAGCATACAAGGCTGCTCTAGAGGATGCAACAACGGTGGCAGTGAAGAGGCTGAAGGAGGTCACAGTTGGAAAACGCGAGTTTGAACAGCAGATGGAGGTAGTGGGGAGAATTAGGCATGACAATGTGGCTGCTCTTAGGGCATATTATTACTCGAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTTTCTGCAATGTTGCATGGCAAAAGAGTGGAAGGCAACGTTTCTTTAGACTGGGATAGCCGATTGAGAATCGCAATCGGTGCAGCTAGAGGCATTGCTCACGTCCACGCACAACATGGTGGGAGACTCATCCACGGAAACATTAAAGCTTCAAACATCTTCCTCAACTCCCAAGGATACGGCTGTTTATCTGATATCGGTCTGGCAACATTGATGAGGCCAATATTCCAGCCAGCATTGAGGGCTGCAGGGTACCGTGCCCCAGAGGTAACAGACGCCCGAAAAGCAACCCCGGCATCCGATGTCTACAGTTTTGGGGTCCTACTTCTCGAGCTTCTAACTAGGAGATCTCCCATACATGCCACAGCAGAAGAGGAGGTTGTTCACTTGGTTAGGTGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGCAGAGTTGCTAAGGCACCCCAATATAGAGGAAGAAATGGTTGAAATGCTACAAATAGGGATGGCATGTGTTGCGAGAATTCCAGATAAGAGACCAACAATGGCTGAGGTCGTGAGAATGGTGGAGGAAATTCGTCGAGTACACAGTGGAAACCGACCGTCCACAGAATCTAGATCAGAAGCTTCTACCCCAACCCACCATGCAGTTGAGACACTTTCCACATCTCTTCCGGAGTAA 1896 0.4552 MGMKLGLLFIFSAAFMIGALFSGVEAEPVADKQALLDFLRNIDHSQPLNWNEKSSVCKSWTGVTCNTDQSRVIALRLPSAGLSGPIPPNTLSRLSALQTVSLVSNRITGSFPSGFYEVKNLTNLYLQLNKFSGPLPSDFSVWNNLTVVNLSNNSFNGSIPFSVSKLTHLTSLVLANNSLSGEIPDLNIPSLQELNLANNNLSGFVPNTLQRFPSWVFSGNNLTSAYALPPDSSVQPSNANQTRKHKRRREAALLGIIIGVCMLGFALVATFMIVCCYRKGGGDGQLVRSQKKEFSPKAEASLNRDRNKIVFFEGCNLAFDLEDLLRASSEVLGKGTFGTAYKAALEDATTVAVKRLKEVTVGKREFEQQMEVVGRIRHDNVAALRAYYYSKEEKLMVYDYYEQGSVSAMLHGKRVEGNVSLDWDSRLRIAIGAARGIAHVHAQHGGRLIHGNIKASNIFLNSQGYGCLSDIGLATLMRPIFQPALRAAGYRAPEVTDARKATPASDVYSFGVLLLELLTRRSPIHATAEEEVVHLVRWVNSVVREEWTAEVFDAELLRHPNIEEEMVEMLQIGMACVARIPDKRPTMAEVVRMVEEIRRVHSGNRPSTESRSEASTPTHHAVETLSTSLPE* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1390 631 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Dod08g1390 631 MobiDBLite consensus disorder prediction 599 631 - -
Dod08g1390 631 Pfam Protein kinase domain 329 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1390 631 Gene3D Ribonuclease Inhibitor 141 251 IPR032675 -
Dod08g1390 631 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
Dod08g1390 631 SUPERFAMILY Protein kinase-like (PK-like) 329 595 IPR011009 -
Dod08g1390 631 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Dod08g1390 631 PANTHER LRR RECEPTOR-LIKE KINASE 17 624 - -
Dod08g1390 631 Gene3D Ribonuclease Inhibitor 30 140 IPR032675 -
Dod08g1390 631 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1390 631 MobiDBLite consensus disorder prediction 607 631 - -
Dod08g1390 631 Gene3D Transferase(Phosphotransferase) domain 1 401 619 - -
Dod08g1390 631 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Dod08g1390 631 SUPERFAMILY L domain-like 41 215 - -
Dod08g1390 631 PANTHER OS05G0588300 PROTEIN 17 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1390 Dod-Chr8 23133323 23136145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1390 20 619 Receptor kinase-like Gene Family AT4G23740 54.849 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod08g1390 Pkinase 3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1390 - - aprc:113851984 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1390 08 23133323 23136145 Dod08g1390 08 23133323 23136145 ECH