Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1387 ATGGAGTGCTCCCATTCAATTGAAATCAAAGCAATAGAAGAACCAACAATATGCATACCACGACACAGTCCATTCAGCGATTCCTTCTACATTAACTTTAGTTGCACACACGAATTCTTGATCCCACGCACAAACTCAACCTCTGAGTTGCCTTCTTCAACCACCGTCAACGATATCTTTTTGGTTCCTTGGGACGTCTTATGTGAGTGTACTGAACTCACAGTTCTAGACAGAGATAACACTGTATTGTTACGTGAAACATTCTCCTCGATGGCTATTTACCCTGGGTTGTTGGACTCAATTCTGCCTCAGATGGGTGAATTCGCAAGGAAGATGATCGCGGAAAGCTATGAAGGATGTAATGTGTGGGAGATGGATGTGAAACTTCATGTTATCACGCAGCCTAGTGAAGATTATTATGATAATGATCTCTACCAGCATGCTCCCATGGCAGCCCAACTTGTCAATCTGTTAGAGCAAGTCAAAATTGACAATGCTTGTCCATATTCTACGGCAATATGTTCAATCTGTTTGGAGGAGCTATGCCATGGATCAAGTTCAGCACTCGTTCGAACCAACTGCTTGCATGTTTTCCATGAAGATTGTATTTTCCGGTGGCTCCTGCAGTGCATCAGCCGCCAGTCATCCTATTGTTGTCCACTGTGCCGCTGCCTAATGATATGTTGA 687 0.4367 MECSHSIEIKAIEEPTICIPRHSPFSDSFYINFSCTHEFLIPRTNSTSELPSSTTVNDIFLVPWDVLCECTELTVLDRDNTVLLRETFSSMAIYPGLLDSILPQMGEFARKMIAESYEGCNVWEMDVKLHVITQPSEDYYDNDLYQHAPMAAQLVNLLEQVKIDNACPYSTAICSICLEELCHGSSSALVRTNCLHVFHEDCIFRWLLQCISRQSSYCCPLCRCLMIC* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1387 228 Pfam Ring finger domain 174 223 IPR001841 -
Dod08g1387 228 SMART ring_2 174 222 IPR001841 -
Dod08g1387 228 ProSiteProfiles Zinc finger RING-type profile. 174 223 IPR001841 -
Dod08g1387 228 CDD RING-H2 174 223 - -
Dod08g1387 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 227 IPR013083 -
Dod08g1387 228 SUPERFAMILY RING/U-box 173 226 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1387 165 226 C3H Transcription Factor Family AT1G57730 37.097 5.03e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1387 - - adu:110273516 188.348