Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1374 ATGAGTTTGAGTATGAGCTACTGCGGAAGTTACGGCAGGGATACTGTTCCTATCAACACGCAGAAGAAACCTTCAGAACCTGACATTTGTGTTCCTTCGAAGTGGAACATTGACAGCAATAGCGTGAAGACAGTTATATGTTCCATGACAGTGGCACACTTGGTTGCTCCGGTTGCTGCAAAAGCTGAAGTAGCTGCTTCTGTTTATGCTTTGGCTGATGCAAACCTAAGTAACTGGTTTGGAGGTTTATTGTATTCAGCCGGGCAACAGGCCAATGAAGCTGTTCAGGACCAACTATCTTCTCTTAGTTTCGCAAGATGCCTAAACTTTGTGAATTGGAACCCGGCAGGGGCATTTGGCTCTGGAAAAAGTAGAGCAGAGGTTACTGGGGATTCCATTGCATTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGAGTGTAGCAGCATCATTTGCTGGAAAGGCATATGGACAGATAGGCCAAGGATTACCTCTGGCTGCTTCCGGTTTGGCTGTAATTATGGGTCCGAACCTTCTTGAGATCATTGAGTTAAGACTCCCCTCATTCTTTGACAGTTTTGATCCACATGCAGCAGTTGCCAATTTCCCATCCAGTGTGCAAGCATATCTGGCTGGGCTTACATTTGCTTTAGCTGCCTCACCTTGCAGCACACCTGTACTGGTCACCCTTCTGGGTTATGTTGCTGCATCCAAGGTACTTTTCATTCTCTTGAAAAGGAGCACTCATGTTCCAGCTCCAACTTTACTAGTTTCAAAACTCTTCGTGTTTCTGATGCATGCTACAATTTGCATTTCCCACAGCGGAGCAATGCTGTTAGGAGGTGGTGTGTATACTTTCTTAGATAGGCTGTTCCCAGCCACATTGGCGATGAAGCTATCACTGCCACCCACTACAACGGAGATTGCAGTGAAGCATCTCCTTGGTTCATCGGCAGCAGATCTCACTACCATATGGTTCGCGGTTGGGCACAAAGCGGGGAAAATCTTGTTGCTGCAGCTTCTTTTCGTCATCAAGGTTCTGGATCCATCTTCTATGACCACCGCAAAGGAGCTCGAATTGGAGCCAGATCTGACCCTCTTTGCCTTTGTTGCCATTGTCCCCCATCCATGGAAATTTTAA 1143 0.4663 MSLSMSYCGSYGRDTVPINTQKKPSEPDICVPSKWNIDSNSVKTVICSMTVAHLVAPVAAKAEVAASVYALADANLSNWFGGLLYSAGQQANEAVQDQLSSLSFARCLNFVNWNPAGAFGSGKSRAEVTGDSIAFSLGLATTLALLSVAASFAGKAYGQIGQGLPLAASGLAVIMGPNLLEIIELRLPSFFDSFDPHAAVANFPSSVQAYLAGLTFALAASPCSTPVLVTLLGYVAASKVLFILLKRSTHVPAPTLLVSKLFVFLMHATICISHSGAMLLGGGVYTFLDRLFPATLAMKLSLPPTTTEIAVKHLLGSSAADLTTIWFAVGHKAGKILLLQLLFVIKVLDPSSMTTAKELELEPDLTLFAFVAIVPHPWKF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1374 380 Pfam Cytochrome C biogenesis protein transmembrane region 122 263 IPR003834 GO:0016020|GO:0017004
Dod08g1374 380 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 41 107 - -
Dod08g1374 380 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 117 298 - -
Dod08g1374 380 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 41 107 - -
Dod08g1374 380 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 117 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1374 Dod-Chr8 22214400 22242941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1374 36 294 Chloroplast and Mitochondria Gene Families AT5G54290 54.667 3.12e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1374 - - gmx:100807029 345.125