Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1356 ATGAGCGACGCCGTATCGGAGCTTAGTACCTCCGATCTCGGCACGCCAAAGCGCCACAGTGCGAGCCGAGAAGGAGGCGAGGACCAAGAGCAAGGTTCCAATGCGGGCAATGACACCAAGAAGAAGAGGAAGCCTAATGGAACTGTCACTCCCCGAAAAAGAGGCTCCAAGGGTAGCACGCCAAAGAAGAATGTGTCGGGTCATAGGATTATGGAGACAGCTTCACCTGATTCAGCTCGAAAGATTGATTTGCGGTTGGAGGCAAAATTGTCAGCGGAGGAGAACTCGAGGATGTTTGCGGGCCGGCAAATACATCCATTTTTTTCGACGTGGAAGGTGGGGAAGAAATCTCAGGAGCTGGCCAGTGTGGAACCTAGTTTATGCACAGCTAGCAGGGAGGATGGAAGAATTATGTGTGGTCCTGTTCATGTTTTTGAAAATTGCCAGGATGATACCTCATCCCTTGACTGGAGTAATTGGACATTTTTGGGCAAGACTGCCATTGTGGGTTGCAGTTCAGAAAGTTCAAGTTCATCTATTTTGGAGGGTTCTGTTGAACCCTTAAGTTTTGATAACCTTCTTGATGCCCTAGATCCGTCCTGCGCTTTAATTTCTAAGAACGCTTTGTCTTGCTCAGATCATCAGCTTTCTGTTCTACCAGACAATCTGCAAGAGATATCACTAGCAAATTCAACTGTGCCAGTTAATGAGCAAACAATATGCCCTCCAAAGCCAGAAGATGCCAACATGGACTTGGAGGTTGATGAAGTCAGTACTTTTTCAGGGAAAGTGGGCTGTTGTAGAAAGTCAGAAACTGAGCCCATGAGTAGATTTCTCCAAGAAAGTATGAAGTCTTACTACCAGAATTGTGAAGATAAGGCTGAGGGAAGCTTATGGACTCACAAGTACAAGCCAACAAAGGCCTTTCAGGTGTGCGGTAATGATGAATCTGTGAATTTCTTGCGTGACTGGTTACATCTTTGGCATGAAAGACGTCAAAGCAGAAAGGATTCCTCTAACAGGGTTCAAAGTGACATGCAAGGCAATGATGATGATTATAATGGTTCTGATGGTGACTATGATTTGGAAGATGTTAATGAGGACAAATCCCTGCGGAACATTCTTCTAGTTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGATGTTTTAGAGCTTAATGCATCAGACTGGCGAAATGGAACTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGGTTCAAAAGGGTATTGGAACGCACTGTGAGTTCACAGAAGAAAACTGTGAAATCACCCCCAGCTCCAGCTTTGCCCGATGAAAAAGTAGCTGAGGAGATGGATGATGGAGTAACTGAGCTGATAACCATATCTGATGATGGATCTCATAGTCCTGATGGAACATCTCCGAGGTTACAATGCAAAAATAGTACATTTACATGTGATAATGCACAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCAGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCTGAGACAGCAAAAGGGCCAATTATTTTGACAAGCAATAGCATTAAGGCTGGTCTTCCAGATAACTTTGCTAGACTAGATGTTTCTTTCTCATTGCCATCACCACACCAGTTGCTTTGCCATTTGTACATGGTTTGTGTCACAGAACAAGTCAACATCAATCCTCTTTTACTGGAGAGGTTTATACAGTCTTGCAATGGAGATATTCGTAAAACCACTATGCAACTTCAGTTCTGGCTCCAGAGCAAAAAATATACAAAAGACCAGAAAGTGCAGTGTGTGTATGGCCTACTTCCATTTGATCTTGAGGCTGGTCATCAGACACTCCCAAAGATAATACCGTGGAGTTTTCCCTCAGAGTTATCCAAACTCATTGACAAGGAAGTTGCCAAGGCAGTAACCATACTGGAACAAAACCCATGCTTGCCCGGGTTAGTCAAGAAAGAGCTTCACTCAAATAAAAAGGAAAATGATTTAGATGTGCATTATATGAGGACTAGTCATGTAGAAGCCAACAAGAGAGGGATGATTAAGAAGAATAGATCTATTGCAGATTGCAGTGGGTTTGAACATCAGTATAATGCTATTTCTGAGCTTTCTACTTTTTCTGGAACCCCAGGGGCATCCTCTTGTCAAAACAGCCAGAGGAAGCTTGTAGTGGTTTCCTCTGATTCTGTGGATAAGGATCCAAATGGACATTTTCTAAATGTGCATGTTGAAGCTTACAAGGGACAATCCCATGAAGGCAATATTGAATCTCCCTGTAAGTTTCAACTTAATCAAAGCTACACAAGCATGTCATTTTGCAAGCTAGTTTGTTCTGGTATGGATGTTTCAAACAAGCAACAGTGTAGATATTTAGGAACAGCTGATGACGCGTGCTTAAATGAAACATGTAAATCATTTGATATGTCCTGTGTGCCAGAATTAATATTTGTTCCTGAGACTGCAATTGAAAATGGAACGGAGACCATGTTTGGAGCAGTGTCTTCTCACCATCTGCGTGATCCAGCTGAAGCTTTCCTGAATAATGTGTTCACTCCATTGACTTTCAATGATCGTCAGTGCGTAGCCAAATTTGCTCAAAATTCAGAACCATTGGTGAATACTAAAATTCCAGAATCTTCTCCAAAAGCAGATGTGCAAGATTTTCAAGATGAGAATATGGGAACTACAACTGTGCAAAATGGGATAGATGAGTGCATTGATGTTGATTTCAAACTGAAGTCAGTGTTCGTTGACTCCAATCCATCTATGGAGACAGATACGGTTCAAAATTTGTGGAGGAAACTTCGTGATTGTCGAATGGATTTAAGACAGCATGCATCCTCAGAACAGCTAGATGCTGTTCGAGTTGTTAAACTTGTTAGTGGGCTGAGCAATCTATTTTCAGAAGCTGACTTGCTGTTTCATAATCACCAACAAAAGCAATGTGGTATTATGGAGCATCCAGTTTTCCTTTCTGATGAAGCCACATTTAGTTGGTGTGATGAACAAATGATGATGTCTACTGTTGCTGTACATGGGTTTTGTTTTTATGCTAAACATGTATCAGATGTGGGATCAAAGCTGGGTTGTGAGACTGACGGTATAGATTTAACTTCAGAGATGCTGGCTTCCTCTACTGATGTTATGGCGCTGGGCAAGTTATCTAGACAGGACCACACGAAAAGCATGAATAACTATTCTAGAAAGCAATTAGAGGTGAGCAAACCCGGAAATGATAAGAGGAGTGAAAACAAAACATCGCTGTTCAAATTGATCCGGTCCATTGTTCCTGCAAGATTATCACTGGCATTGAAAGGTATTTCTTTCAATGAGTATCTATCCTCACTGCGCCAAATTTCAACTTCAGAAAGTTTCCGCATTTCACAAGGTGTTGAGAAGAAGAGAGGACGAAGGGTGCGGAGTGCTCAACATTATTTGAGCAGAGGCACAATGATGTTGTCTCCTGAAGATATATTATTGGTGTGTGAGGGTGATTTGTACAGAAAGATTTCTTCACAATACAGAGCTAACTAG 3588 0.4228 MSDAVSELSTSDLGTPKRHSASREGGEDQEQGSNAGNDTKKKRKPNGTVTPRKRGSKGSTPKKNVSGHRIMETASPDSARKIDLRLEAKLSAEENSRMFAGRQIHPFFSTWKVGKKSQELASVEPSLCTASREDGRIMCGPVHVFENCQDDTSSLDWSNWTFLGKTAIVGCSSESSSSSILEGSVEPLSFDNLLDALDPSCALISKNALSCSDHQLSVLPDNLQEISLANSTVPVNEQTICPPKPEDANMDLEVDEVSTFSGKVGCCRKSETEPMSRFLQESMKSYYQNCEDKAEGSLWTHKYKPTKAFQVCGNDESVNFLRDWLHLWHERRQSRKDSSNRVQSDMQGNDDDYNGSDGDYDLEDVNEDKSLRNILLVTGPVGSGKSAAVYACAQEQGFDVLELNASDWRNGTAVKQYFGDALGSHGFKRVLERTVSSQKKTVKSPPAPALPDEKVAEEMDDGVTELITISDDGSHSPDGTSPRLQCKNSTFTCDNAQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSIKAGLPDNFARLDVSFSLPSPHQLLCHLYMVCVTEQVNINPLLLERFIQSCNGDIRKTTMQLQFWLQSKKYTKDQKVQCVYGLLPFDLEAGHQTLPKIIPWSFPSELSKLIDKEVAKAVTILEQNPCLPGLVKKELHSNKKENDLDVHYMRTSHVEANKRGMIKKNRSIADCSGFEHQYNAISELSTFSGTPGASSCQNSQRKLVVVSSDSVDKDPNGHFLNVHVEAYKGQSHEGNIESPCKFQLNQSYTSMSFCKLVCSGMDVSNKQQCRYLGTADDACLNETCKSFDMSCVPELIFVPETAIENGTETMFGAVSSHHLRDPAEAFLNNVFTPLTFNDRQCVAKFAQNSEPLVNTKIPESSPKADVQDFQDENMGTTTVQNGIDECIDVDFKLKSVFVDSNPSMETDTVQNLWRKLRDCRMDLRQHASSEQLDAVRVVKLVSGLSNLFSEADLLFHNHQQKQCGIMEHPVFLSDEATFSWCDEQMMMSTVAVHGFCFYAKHVSDVGSKLGCETDGIDLTSEMLASSTDVMALGKLSRQDHTKSMNNYSRKQLEVSKPGNDKRSENKTSLFKLIRSIVPARLSLALKGISFNEYLSSLRQISTSESFRISQGVEKKRGRRVRSAQHYLSRGTMMLSPEDILLVCEGDLYRKISSQYRAN* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1356 1195 MobiDBLite consensus disorder prediction 1080 1100 - -
Dod08g1356 1195 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 10 1194 IPR004582 GO:0006281
Dod08g1356 1195 CDD AAA 362 436 - -
Dod08g1356 1195 MobiDBLite consensus disorder prediction 335 362 - -
Dod08g1356 1195 MobiDBLite consensus disorder prediction 1 78 - -
Dod08g1356 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 608 IPR027417 -
Dod08g1356 1195 Gene3D - 296 549 IPR027417 -
Dod08g1356 1195 MobiDBLite consensus disorder prediction 1 16 - -
Dod08g1356 1195 Gene3D - 555 617 - -
Dod08g1356 1195 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 10 1194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1356 Dod-Chr8 21315868 21326044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1356 299 409 Core DNA Replication Machinery Family AT5G22010 28.829 3.35e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1356 - - ahf:112785977 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1356 08 21315868 21326044 Dod08g1356 08 21315868 21326044 ECH