Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1349 ATGTTGAAGGGTTCCATCCACAAACTCACAAGTCATAAGCGAAAGCTCCTTGGTGAGTTTGTCTGTATATTCTTTGTGAGTGTGTCAGAGTATAACCACAGAGAGACACGTACGGATATGGAGGACCACAGTGCATGTGGTGGGATGAGCAAGGTGCTCCCCAAGGTGAAGCCATACGTTGCCATGGTTGCCCTTCAGTTTGGCTATGCCGGAATGTATGTCATCACCATGGTTTCTTTCAAGCATGGAATGAGCCATTGGATACTCTCAGTCTACCGTCATTTAGTTGCCACCCTCATCATGGCCCCTTTTGCCTTTGTCCTCGAAAGAAAAATAAGGCCAAAGATGACACTCCCCATATTCCTGAGGTTAGCGGCGCTTGCTTTTCTTGAGCCAGTGCTTGATCAGAACTTGTACAACATTGGGATGAAGATGACTTCAACAACGTTTGCATCGGCCATCGTTAATGTCCTCCCAGCCATTACTTTTATAATGGCACTCGTTTTCAGGTTGGAGACAGTAAACTTGAAGAAAGTTCACAGCGTAGCCAAGGTAGTTGGAACCGCAGTAACAGTCACAGGAGCCATGGTTATGACTTTGTACAAAGGCCGCTCCTTTCAGATCATAAAAGGAGCTGCAGGGACCCACCCTGGCAGCGCCAGCACCGAGCCCTCTGACCAACACTGGGTGCTTGGCACAGTAATGCTCATAGCAAGTTGCGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTCACTCTGAAGTTGTACCCGGCAGAGCTCTCGCTCACAGCTTGGATTTGCTTTCTGGGTATTTTTGAGGGTGCAATTGCGTCCCTTATTTTTGAACGTGACATGAGCGTCTGGTCCATAGGCTGGGACTCAAGGCTGCTGGCTTGTGTTTATTCTGGGGTGGTGTGCTCTGGAATTGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCAGTGTTTGTGACTTCTTTCAGCCCTCTGATTATGATCATCACCGCTGCATTGGGTTCCTTTGTCTTAGCTGAGCAAGTTCATGTTGGAAGTATAATTGGAGCTATAATCATTGTCTGCGGGCTTTACACTGTGGTATGGGGTAAAAGCAAAGACATGAACACAACTGGAAGCAGGGAAATCTGA 1155 0.4753 MLKGSIHKLTSHKRKLLGEFVCIFFVSVSEYNHRETRTDMEDHSACGGMSKVLPKVKPYVAMVALQFGYAGMYVITMVSFKHGMSHWILSVYRHLVATLIMAPFAFVLERKIRPKMTLPIFLRLAALAFLEPVLDQNLYNIGMKMTSTTFASAIVNVLPAITFIMALVFRLETVNLKKVHSVAKVVGTAVTVTGAMVMTLYKGRSFQIIKGAAGTHPGSASTEPSDQHWVLGTVMLIASCGGWASFFILQSFTLKLYPAELSLTAWICFLGIFEGAIASLIFERDMSVWSIGWDSRLLACVYSGVVCSGIAYYVQGVVTRERGPVFVTSFSPLIMIITAALGSFVLAEQVHVGSIIGAIIIVCGLYTVVWGKSKDMNTTGSREI* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1349 384 PANTHER WAT1-RELATED PROTEIN 52 379 - -
Dod08g1349 384 PANTHER WAT1-RELATED PROTEIN 52 379 IPR030184 GO:0016021|GO:0022857
Dod08g1349 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 92 203 - -
Dod08g1349 384 Pfam EamA-like transporter family 232 369 IPR000620 GO:0016020|GO:0016021
Dod08g1349 384 Pfam EamA-like transporter family 67 189 IPR000620 GO:0016020|GO:0016021
Dod08g1349 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1349 Dod-Chr8 21048513 21053448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1349 53 375 Nodulin-like Gene Family AT4G08300 67.178 1.88e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1349 - - gmx:100814921 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1349 08 21048513 21053448 Dod08g1349 08 21048513 21053448 ECH