Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1318 ATGAATCACATACCGCGATTCTTCGGCCATAGGAGCAAGCACCGCAACCAATCCACCAACAGCGGCATGGGATTGGGCACGGATCCGAAGAAGGGCCGAAGGAAACCGCGTCTCGAGCGCCGCAACGCCGCAAAGAACTTCGACTACGACGCCGGCTCTTCTTCCTCGTCGCTTGACGACTCCTCCACGTGCTCCTCCTCCGTCAGCGGCGGCGGTGGCTCGCTGCTCTACACGCGGTCGATGGAGTTCTACGACCGGAAGAGCTTCCGGATCGAGGGCGTCGAGGGCGAGTTCGACCGGATTTGCCGGAGCCTCGGGCTCTCCGGCCCGGATGACTTCGCGATTCCGGCGGCGGCGTGGGAGGCCATGAAGGTTCGATCCTCTTCGGATATTCTTCCCAGGCTGAAGAAGCATCGCGATTTGGATGAAATCAACGAGAGTGAGGAAATTGGAGCAAAGGAAGGTAAAAAACTTGGGGATAATTGCGAAGATAGGGTTTCTGATCAGCGCGTTCAAGACGGTGGCTGCGGAAATTGCGGCACCACAGTAACTGCTGGCGGCGGCGGCGGTGGTGGCGGAGGTATCAAGGGTGCTCGGCCTCCAATGCTGAAGCCGCCGCCGGGGATCAAGGTTTCGGTTGTGGATAACACGTGCTCCACGTGGGACCTCTTGAGGGATTTTGCGCCGCCAGGCGAAGGAAAGGAGAATTACGTGGAACCCAGTGATTCGGATGATGATGATCATCGAGAGAATAGAAAAACAGCGGCGGAAGAAGAGGAAAAAGGAGAAAGAGGAGAGGGTGGTGGTGTTGTTAACGGGAAGAGAGAAGAAGAAGAGGAGGAGAATGCGTTAAGGCTTGCGGAGATTGTTGCTGAGCTTTCTGCGTCATGCTCGTTCACCACTTCCAATGAAGATGATTCATCTAGCACTACCACGGATCCTAGGTCCAACAACATATCTCCTAATGGGAGATTTAAGCGTATTATCACCAATTGGCAGAAGGGTGAGCTTTTGGGTCGTGGTTCGTTTGGGTCTGTCTTTGAAGGAATTTCAGAAGACGGATTCTTTTTTGCTGTAAAAGAAGTTTCATTGCTTGATCAAGGGAATCAGGGAAAGCAAAGTGTCTATCAACTGGAGCAGGAGATTGAACTTTTGAGTCAGTTTGAACACGAGAATATAGTTCAATACTATGGGACAGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCCCTTTTAAGCCTCTACCATAGGTATACTCTTCGGGATTCCCAAGCATCTGCCTATACAAGGCAGATACTGCATGGTTTAAAGTATCTTCATGATCGAAATGTCGTTCACAGGGATATTAAATGTGCGAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAATCAAATTGAACGATGTTAAATCCTGCAAGGGAACGGCATTCTGGATGGCCCCGGAGGTTGTGAGAGGAAAGAACCAAGGGTATGGACTTCCAGCTGATATATGGAGTTTGGGATGCACTGTGTTGGAGATGTTGACGGGCGACGTTCCATATGCTCAGTTGGAATGTATGCAGGCACTGTTTAGAATTGGAAAAGGTGAGCCACCTACAGTGCCTGATTCTCTTTCAAAAGATGCAAAGGATTTCATCCTGCAGTGCCTTAAAGTTAATCCAAATGATCGTCCCACTGCTGCTCAACTCTTAAATCATTCATTTGTCCAAAGGCCTCTTTCCCAATTGTCTGGCTCTGCATCTCCTTATATTCCCAGAAAAAGGGTTTGA 1818 0.4967 MNHIPRFFGHRSKHRNQSTNSGMGLGTDPKKGRRKPRLERRNAAKNFDYDAGSSSSSLDDSSTCSSSVSGGGGSLLYTRSMEFYDRKSFRIEGVEGEFDRICRSLGLSGPDDFAIPAAAWEAMKVRSSSDILPRLKKHRDLDEINESEEIGAKEGKKLGDNCEDRVSDQRVQDGGCGNCGTTVTAGGGGGGGGGIKGARPPMLKPPPGIKVSVVDNTCSTWDLLRDFAPPGEGKENYVEPSDSDDDDHRENRKTAAEEEEKGERGEGGGVVNGKREEEEEENALRLAEIVAELSASCSFTTSNEDDSSSTTTDPRSNNISPNGRFKRIITNWQKGELLGRGSFGSVFEGISEDGFFFAVKEVSLLDQGNQGKQSVYQLEQEIELLSQFEHENIVQYYGTEMDESKLYIFLELVTKGSLLSLYHRYTLRDSQASAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKAIKLNDVKSCKGTAFWMAPEVVRGKNQGYGLPADIWSLGCTVLEMLTGDVPYAQLECMQALFRIGKGEPPTVPDSLSKDAKDFILQCLKVNPNDRPTAAQLLNHSFVQRPLSQLSGSASPYIPRKRV* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1318 605 MobiDBLite consensus disorder prediction 298 322 - -
Dod08g1318 605 Pfam Protein kinase domain 333 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1318 605 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 598 - -
Dod08g1318 605 MobiDBLite consensus disorder prediction 48 70 - -
Dod08g1318 605 MobiDBLite consensus disorder prediction 1 70 - -
Dod08g1318 605 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 84 598 - -
Dod08g1318 605 ProSiteProfiles Protein kinase domain profile. 332 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1318 605 SUPERFAMILY Protein kinase-like (PK-like) 309 592 IPR011009 -
Dod08g1318 605 SMART serkin_6 332 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1318 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Dod08g1318 605 MobiDBLite consensus disorder prediction 186 207 - -
Dod08g1318 605 MobiDBLite consensus disorder prediction 224 283 - -
Dod08g1318 605 Gene3D Transferase(Phosphotransferase) domain 1 329 598 - -
Dod08g1318 605 MobiDBLite consensus disorder prediction 237 283 - -
Dod08g1318 605 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1318 Dod-Chr8 19630644 19638661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1318 37 589 MAP Kinase Kinase Kinase AT4G08500 52.824 8.24e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod08g1318 Pkinase 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1318 K13414 - gmx:100819177 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1318 08 19630644 19638661 Dod08g1318 08 19630644 19638661 ECH
Dod08g1318 08 19630644 19638661 Dod09g1354 09 34798501 34805793 PCT