Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1309 ATGGATGAGAAAGTTAAGAAGAAAAAGTCAATGATTGAAGAAAGCAGTTTGGGAAGTAGTTTGGAGCCAAATAAAAGGAAGGAGAAACACAAGGAGAGAAAGAAAATGCATGGAACTGATAAAACACTCGATGAGAATGAAGCTGTTGGGGGAATTTTTATTGATGAAGCTAGCAAGAGACAAGCTTGCTCCATTGACAGGAAATTTGTGAGGGACAGAGAAGAGGGTGACATCAGTAAGAGAAAGAAGAAAAAGGGGAGAAAAGATACTGGAGTGGTAAATAATAATATTGCTTATGATAAAGCAGCAGAGATCTTGGATGACAACAAGAAAAGCAAGATGAGAAAAGAAAAAATTGTGATGATTCATTATCTGGAGTGCAAGAAACAGGTGCTTCAAAAACCAAGTAAAAAAGGCAAATTGACAGGGGATAATTACTTTGAGGACAGTGAAGGTGATCCTCCTATGGATGGAATCAGCGCAGGAGATTCTATTGCACATTCTCTTGTCAATGAAGTAGATGATCTAGGTAAGAAGGAAAAGAAGAAATTGAACAAAAGAACTAAAAGGATGGAAGAAGGCCATAAAAGCAATGACGTTGACCATTCTGTTGTTGATGAAGAGGGGCAAGGCAAGGGGATGGAGAAGGTACTGAGGAAGACAGTGAAAAGAACCAAAGATGAAGAGTGTAAAACCAATGAAGGTGATCCTTGTTTGACTGAAAGCATTGTAGCTGATCCACCTCTGGTTAGAAGCAATGAAGATGATCAATATTTGGTTAGAAACAATGAAGCTGAAGATGACCAAGCCAAGAAGATGAAAAAAAAGAAGAATAAGAAGAAGGAAAAACTGAGTGGTAAAAGCATATGTAAGGAGAAAAATGAGGTTAAAAGCAACAAAGGTGATCAAGTTTTGGTCAAAGGAAATGAAGGTGAGGGTGATGGCCAAGGAAAGAAAAGGAAGAAGAGGAAACCAAGTGACAAAAGCAAAAGTAAGAAGAGCAGTGAAATTAATGATCAAGGAAAGAAGATGAAGATAAAGAAGAAAGCCAAAGTAGGCACTGGTGAAACTTCTAACCCTGCACCTGATGGAACCTCCAAACCCAAGCGAGTAACTTTCTCTGATCAAGTGGGGGTTTGTTGTGATGGCTTAATACGTGGGAAAAGGTTTACACTTGAAGAAGATGAGAAGATTAAAGAGGCTGTTTTAGACTATATAGAGTCTCATGGTTTGGGTGATGAAGGTCTAGATAAGGTTCTCCATTCCGGATCTCATCCTGAAGTTAGAAATTGTTGGAAGGAAATTGGAACGGCCTTGCCCAATAGGCCATGCTATAGCGTGTATTCTCGTGCTCATATTTTGTTTGAAAGGGATGAGAAGCGTAAATGGACAACTGAAGAGCTTGATTTTGTAAAAAAGGTGCAGGAACAACATGGAAATGATTGGAAATCAGTAGCTGAAGCATTGGGTAAAAATCGATTCCATGTAAAGGATGCGTGGCGTAGAATAAAATTTATCAATAAAAAGAAAGGGCATTGGTCTCAAGAGGAGTATCAACAGTTATTTGATTTAGTAAACCTGGACCTACGTGCAAGGGCTTTAGAAGATCATAGAAAAGCAAAACATGGCATGTTGCGAGATAATATTTGTTGGGAGGCAATTGGTACCAAGTTGGCAACCAGAACCAGTTCGTTTTGCTGCAAAAAGTGGTACAAGCAATTAACGTCACCTATGGTTACTCAAGGTGTATGGAGTGATACTGATGACTACCGCATGCTGAATGCCTTAATTGTCTTGGATGCTTGCTGCATGGAGGATGTAGACTGGGACAATCTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGATGGGACCAAATGGTCCGATACATTGGGGAGCATGGGAGAAAATCATTTGCTGAGCAGGTGGAAATTCTTGCAAAAAGATTCTGCCCTGATTTATTGGAAGCAAGAGAAGCCTTTGATAGCAAACCTGTGTTTTGTTGA 2010 0.396 MDEKVKKKKSMIEESSLGSSLEPNKRKEKHKERKKMHGTDKTLDENEAVGGIFIDEASKRQACSIDRKFVRDREEGDISKRKKKKGRKDTGVVNNNIAYDKAAEILDDNKKSKMRKEKIVMIHYLECKKQVLQKPSKKGKLTGDNYFEDSEGDPPMDGISAGDSIAHSLVNEVDDLGKKEKKKLNKRTKRMEEGHKSNDVDHSVVDEEGQGKGMEKVLRKTVKRTKDEECKTNEGDPCLTESIVADPPLVRSNEDDQYLVRNNEAEDDQAKKMKKKKNKKKEKLSGKSICKEKNEVKSNKGDQVLVKGNEGEGDGQGKKRKKRKPSDKSKSKKSSEINDQGKKMKIKKKAKVGTGETSNPAPDGTSKPKRVTFSDQVGVCCDGLIRGKRFTLEEDEKIKEAVLDYIESHGLGDEGLDKVLHSGSHPEVRNCWKEIGTALPNRPCYSVYSRAHILFERDEKRKWTTEELDFVKKVQEQHGNDWKSVAEALGKNRFHVKDAWRRIKFINKKKGHWSQEEYQQLFDLVNLDLRARALEDHRKAKHGMLRDNICWEAIGTKLATRTSSFCCKKWYKQLTSPMVTQGVWSDTDDYRMLNALIVLDACCMEDVDWDNLLEHRSGDVCRKRWDQMVRYIGEHGRKSFAEQVEILAKRFCPDLLEAREAFDSKPVFC* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1309 669 MobiDBLite consensus disorder prediction 257 273 - -
Dod08g1309 669 MobiDBLite consensus disorder prediction 172 235 - -
Dod08g1309 669 MobiDBLite consensus disorder prediction 1 43 - -
Dod08g1309 669 Gene3D - 504 579 - -
Dod08g1309 669 ProSiteProfiles Myb-like domain profile. 576 629 IPR001005 -
Dod08g1309 669 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 460 510 IPR017930 -
Dod08g1309 669 SUPERFAMILY Homeodomain-like 460 521 IPR009057 -
Dod08g1309 669 Gene3D - 464 503 - -
Dod08g1309 669 SMART sant 459 506 IPR001005 -
Dod08g1309 669 SMART sant 509 576 IPR001005 -
Dod08g1309 669 SMART sant 386 457 IPR001005 -
Dod08g1309 669 MobiDBLite consensus disorder prediction 133 370 - -
Dod08g1309 669 MobiDBLite consensus disorder prediction 285 300 - -
Dod08g1309 669 PANTHER GB|AAC33480.1 23 668 - -
Dod08g1309 669 CDD SANT 462 504 IPR001005 -
Dod08g1309 669 MobiDBLite consensus disorder prediction 67 82 - -
Dod08g1309 669 MobiDBLite consensus disorder prediction 329 343 - -
Dod08g1309 669 Pfam Myb-like DNA-binding domain 463 521 - -
Dod08g1309 669 ProSiteProfiles Myb-like domain profile. 455 504 IPR001005 -
Dod08g1309 669 Coils Coil 262 283 - -
Dod08g1309 669 MobiDBLite consensus disorder prediction 67 89 - -
Dod08g1309 669 ProSiteProfiles Myb-like domain profile. 505 574 IPR001005 -
Dod08g1309 669 CDD SANT 513 572 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1309 Dod-Chr8 19427582 19449421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1309 404 631 MYB-Related Transcription Factor Family AT3G18100 24.895 1.05e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod08g1309 Myb_DNA-bind_6 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1309 - - adu:107465053 689.878