Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1307 ATGGACCAAAATAATGCTCAACAACTCAATCACCATGTGGTTGTTCATGGTCCTATTGGTGGTATTGGTAATGGTGACCGTCATGGTCAGGCTCACCATGCTGACCTTATTGTTATAGATGATGAAAATGATGAACTAGGGGCTGCTGAAATTATTGACGAGAATTTTTTGCCTGGAGCCTTTTCTGCACAAGCTTTCCCAAATAGGAGGACCAAAGTTGAGTTAAGGGATGCTCAAGGCAATTCCTATGCTATCACAATTCGATGGGGAAAGAGACGAGCTTGGGAGGCTTACCTATCTAAGGGGTGGTTGGAGTTTGTGAGGAAAAATGGAATTAGAGCTGGAAGTGTGGTTGTAAGCAGCATCCAATATTTATTCAAACCAGTTTATTTGGTCATATTTGATGAGTATTTGTTATGTCATATTATAGCCAATGGTCCAATTCTGGATGTATATGAACCAAACAGGGGTTCCAATGAGCATACAGGTACCAGACGAAGATTATTATCTTCAGCTATAAACAATACCAGCCAGTGTTTCACCTCAAACACAGATTCACAAGAATATAACTCTTTTAAGAAAAATACTATGAGTGTTGAACAGTCCCCAGAACAAGCACGGACTATTAAACTAGTACAAAGCGAAGGTCGTTCTCGCGGACCCAACATTCTGTCCTGCTGCAGTTTCACTTTCACATTCCCTGACGCAACCCGTTGCGACTTTCGAATATCATTCACCATCAACCCTCAACTCTTCACGCGTCCCTATGGACACAACATCGTCTGCTCCCGCACCACCCAATCCGCCCCGTCCCCGACCATCGTACCGCTCCTTCCGCTGCTCCTGTTTCAGACGCTGTTGTCGCTGTTTCTGCTGTTTCTATTCCTTCCCTTAAACCCCCTCTCTCTCCTCTCCATGCAAAATTCCAAACCTCACTCTTTACTCACTACCAAAATTGATGATCAGAACTTGTTCTCGTTCCATGTGAACTCAACCCCTTATGTCTCTGTTGTTTATGGCGTTTGTGAGCTCACTGAAGCTCTGATTTGGTTTTCTTTGGAGGTAGGAGCATTAGAGGCGACGATGCAATTCTTTATTCTTCTTTGCTTCTTCCTGAAGAAGGAAGCAAACATCGAAGAGAATATTTCCCTCTCCTTGGTTTGCTTTTTCTACCATGAATGCTTAAAATTTCATGAAATTACTCTTGTGAATGAAAATTCTATTTCATAA 1230 0.4252 MDQNNAQQLNHHVVVHGPIGGIGNGDRHGQAHHADLIVIDDENDELGAAEIIDENFLPGAFSAQAFPNRRTKVELRDAQGNSYAITIRWGKRRAWEAYLSKGWLEFVRKNGIRAGSVVVSSIQYLFKPVYLVIFDEYLLCHIIANGPILDVYEPNRGSNEHTGTRRRLLSSAINNTSQCFTSNTDSQEYNSFKKNTMSVEQSPEQARTIKLVQSEGRSRGPNILSCCSFTFTFPDATRCDFRISFTINPQLFTRPYGHNIVCSRTTQSAPSPTIVPLLPLLLFQTLLSLFLLFLFLPLNPLSLLSMQNSKPHSLLTTKIDDQNLFSFHVNSTPYVSVVYGVCELTEALIWFSLEVGALEATMQFFILLCFFLKKEANIEENISLSLVCFFYHECLKFHEITLVNENSIS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1307 409 CDD B3_DNA 57 119 IPR003340 GO:0003677
Dod08g1307 409 Gene3D - 41 134 IPR015300 -
Dod08g1307 409 ProSiteProfiles B3 DNA-binding domain profile. 57 137 IPR003340 GO:0003677
Dod08g1307 409 Pfam B3 DNA binding domain 57 119 IPR003340 GO:0003677
Dod08g1307 409 SUPERFAMILY DNA-binding pseudobarrel domain 56 119 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1307 Dod-Chr8 19385020 19402059 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod08g1307 B3 2.2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1307 - K00694 adu:110275864 55.8398