Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1289 ATGGGTCATCAAGCTGATGAAAATCTTGAAACAAAAGAGATGGACGTGAGAAGCTTGTCATCTTCACATGACCAGGCGCCATACGTTCACAAAGTGGGAGTTCCCCCAAGACAAAACCTCTTCAAGGAATTTCGAGCCAGTGTGAAAGAAACATTCTTCCCAGATGATCCTCTTCGGTCCTTTAAGGACCAAACAAAATCCAGGAAGTTCATTATGGGAATTGAAGCCATATTCCCCATACTTGGTTGGGGGAGAAATTACAGCCTCAAAAAATTTAAAGGGGATCTTATAGCTGGTCTAACTATTGCAACTCTCTGCATTCCTCAGGACATTGGGTATGCAAAGCTTGCAAATCTGGCCCCTCAATATGGACTGTACTCCAGCTTTGTTCCACCACTGATTTATGCTGTCATGGGGAGTTCTCGTGATATTGCTATTGGACCAGTGGCGGTGGTTTCTCTCTTGTTGGGGACCTTACTTCAGAGTGAGATTGATCCCATTGCAAATGCAGCAGAATATCGCAGACTTGCTTTTACTGCCACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGGATATTTAGGTTAGGATTTTTGATTGACTTCCTATCCCATGCTGCAATTGTTGGTTTTATGGGGGGAGCTGCCATTACAATTGCTCTTCAACAGCTTAAGGGCCTCCTTGGGATTGAGAAGTTCACAAAGAAAACTGATGTCATCTCTGTGATGCATTCAGTATTCTCATCTGCCCATCATGGGTGGAACTGGGAAACTATAGTTATTGGAGCAACCTTTCTGGCTTTTCTACTGTTTGCCAAATACATTGCAAAAAAGAACACAAAATTCTTCTGGGTTCCAGCAATTGCCCCGTTGTTATCCGTTGTGCTCTCAACTTTTATTGTATTCATAACCCGTGCAGACAAACAAGGTGTTGCAATTGTGAAACATATAGAAAAAGGGGTCAACCCTTCGTCTGTGAAGGAAATTTATTTTAGTGGTGATTACCTTGGGAAAGGTTTTAGAATCGGCATCGTGGCTGGCATGATAGCACTGACTGAAGCCACAGCAATTGGAAGAACATTTGCTTCTATTAAGGACTATCAATTGGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACCTCCTGTTACGTAGCAACTGGTTCTTTCTCTCGGTCAGCCGTAAATTTCATGGCAGGCTGCGAAACTGCAGTCTCTAATATTGTCATGTCCATAGTTGTGTTCTTAACCCTGCAATTCATCACACCTCTTTTCAAGTACACTCCAAATGCTATCCTTTCTTCCATCATCATTTCTGCTGTCATCAACCTTGTGGACTATAAGGCAACAATCTTGATATGGAAGGTTGACAAGTTTGACTTTGTTGCTTGCATGGGGGCATTCTTTGGGGTTGTTTTTGCCTCAGTTGAGATAGGCCTTCTAATTGCTGTCTCTATATCCTTTGCAAAGATTCTTCTACAAGTCACAAGACCCCGAACTGCTATTCTGGGGAAGATCCCTAGGACAGCTGTGTATAGAAACATCCAACAATACCCAGAAGCCACTAAGGTTCCTGGTGTATTGATTGTAAGAGTTGATTCTGCAATATATTTTTCCAACTCCAACTATGTCAAAGAAAGGATTTTAAGATGGCTGATGGATGAGGAAGAACAAGTGAAAGGAGAGTACCAAACAAGAATCCAATTTTTGATAGTTGAGATGTCACCTGTTACTGACATAGATACCAGTGGCATCCATGCCCTTGAAGAGTTATACAGAAGTCTTCAGAAAAGAGATGTTCAGCTTGTTCTGGCAAATCCTGGCCCTGTAGTGATAGACAAGCTCCACACATCCAACTTTGCTCATTTGCTTGGTGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATACTGTTCTCCAAAACTGGCTGAGGACCCCTGA 1968 0.4248 MGHQADENLETKEMDVRSLSSSHDQAPYVHKVGVPPRQNLFKEFRASVKETFFPDDPLRSFKDQTKSRKFIMGIEAIFPILGWGRNYSLKKFKGDLIAGLTIATLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQSEIDPIANAAEYRRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIEKFTKKTDVISVMHSVFSSAHHGWNWETIVIGATFLAFLLFAKYIAKKNTKFFWVPAIAPLLSVVLSTFIVFITRADKQGVAIVKHIEKGVNPSSVKEIYFSGDYLGKGFRIGIVAGMIALTEATAIGRTFASIKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIVMSIVVFLTLQFITPLFKYTPNAILSSIIISAVINLVDYKATILIWKVDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTAVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLMDEEEQVKGEYQTRIQFLIVEMSPVTDIDTSGIHALEELYRSLQKRDVQLVLANPGPVVIDKLHTSNFAHLLGEDKIFLTVAEAVAYCSPKLAEDP* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1289 655 Pfam Sulfate permease family 92 472 IPR011547 GO:0016021
Dod08g1289 655 SUPERFAMILY SpoIIaa-like 526 648 IPR036513 -
Dod08g1289 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Dod08g1289 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Dod08g1289 655 PANTHER SULFATE TRANSPORTER 12 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod08g1289 655 TIGRFAM sulP: sulfate permease 79 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod08g1289 655 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 12 655 - -
Dod08g1289 655 Pfam STAS domain 525 643 IPR002645 -
Dod08g1289 655 Gene3D STAS domain 504 651 IPR036513 -
Dod08g1289 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1289 Dod-Chr8 18727778 18733205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1289 2 654 Inorganic Solute Cotransporters AT1G22150 76.263 0.0 1005
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1289 K17470 - gmx:100797668 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1289 08 18727778 18733205 Dod08g1289 08 18727778 18733205 ECH
Dod08g1289 08 18727778 18733205 Dod09g1326 09 34527391 34533541 PCT