Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1278 ATGACAAACCAGAATGTAGTGGCACCTGTTATGAAATCACGTGTCAACAAGATCGTGGAGTTGGCAGTGTCGATTTCGACCTCAACTCTTCTGCCAAGGGCACAAGTGCCCGAATCAATGGCCTTGGCTGGTGGGTTTTTGGGCCAATACCAGAAGAGGCTTCTCTTCACGTTGGAGGATGGTGGTGTCAAAGGAGGAGCCAAAGTTAACAGGTGGATTGAATCAATGAGAGCCTCTTCCCCTACTCGAGTCAAATCCAACAACACGCTTACCTCAGAAAACCAAGACAAAAATCCTTGGATTCTTTATCATCCATCGGCGCTGAGCATGTTTGATGAGATAATATGTAATTCGAAAGGGAAGCAGATTGTGACCTTTCTTGACTACGATGGAACTCTCTCCCCAATTGTGGCAGATCCAGATAAAGCATTCATGAGCAAAAAGATGAGAGCGACACTGAAGGAGATAGCAAAGCATTTTCCCACAGCAATCGTTAGCGGAAGGTGCATTAACAAGGTATACGACTTTGTAAGATTGGGAGAGCTGTACTATGCTGGAAGCCACGGCATGGACATCACGGGACCAATGAAAGGCCGAAATCATAAGAAAGGTAATGGAGCAGCGCTTTTCCAAGCTGCGAGTCAATTCCTGCCCATGATCGATGAGGTGTACAAGATCTTGGGAGAAAAAATAAAATCTGTTCCGGGAGCTAAGGTTGAAAATAACAAGTTTTGCTTGTCCGTGCACTTTCGGTGTGTTGACGAGAAGCGCTGGCCAGCATTGGCGGAGCAAGTTAAATCGGTGCTCAATGAGTACCCAAAACTTAGGCTAACCCAAGGGAGAAAAGTGCTTGAGATCCGTCCAACCATAAAATGGGACAAGGGCAAGGCTATAGAGTTCTTGCTAGAGTCACTAGGTTATGCCAATTCCAATAACGTATTTCCGATCTACATTGGTGATGATCGAACTGATGAGGATGCTTTTAAGGTTCTGCGCAGTAGGGGCCACGGGATTGGGATTCTTGTTTCTCAATTTCCAAAAGAAACTCATGCTTCCTACACTTTGCAAGATCCGGCAGAGGTTGGACAATTTTTACGGCGTTTGGCAGAGTGGAAGAGAGCGGGTCCCTGA 1131 0.4615 MTNQNVVAPVMKSRVNKIVELAVSISTSTLLPRAQVPESMALAGGFLGQYQKRLLFTLEDGGVKGGAKVNRWIESMRASSPTRVKSNNTLTSENQDKNPWILYHPSALSMFDEIICNSKGKQIVTFLDYDGTLSPIVADPDKAFMSKKMRATLKEIAKHFPTAIVSGRCINKVYDFVRLGELYYAGSHGMDITGPMKGRNHKKGNGAALFQAASQFLPMIDEVYKILGEKIKSVPGAKVENNKFCLSVHFRCVDEKRWPALAEQVKSVLNEYPKLRLTQGRKVLEIRPTIKWDKGKAIEFLLESLGYANSNNVFPIYIGDDRTDEDAFKVLRSRGHGIGILVSQFPKETHASYTLQDPAEVGQFLRRLAEWKRAGP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1278 376 Gene3D - 213 289 - -
Dod08g1278 376 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 15 374 IPR044651 GO:0004805|GO:0005992
Dod08g1278 376 TIGRFAM T6PP: trehalose-phosphatase 121 369 IPR003337 GO:0003824|GO:0005992
Dod08g1278 376 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 334 IPR006379 -
Dod08g1278 376 SUPERFAMILY HAD-like 126 371 IPR036412 -
Dod08g1278 376 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 15 374 - -
Dod08g1278 376 Pfam Trehalose-phosphatase 126 358 IPR003337 GO:0003824|GO:0005992
Dod08g1278 376 CDD HAD_TPP 126 362 - -
Dod08g1278 376 Gene3D - 126 355 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1278 Dod-Chr8 18268188 18271579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1278 119 370 Trehalose Biosynthesis Gene Families AT1G70290 25.926 5.89e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1278 K01087 - gmx:100792915 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1278 08 18268188 18271579 Dod08g1278 08 18268188 18271579 ECH
Dod08g1278 08 18268188 18271579 Dod09g1312 09 34285338 34288135 PCT