Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod08g1226 | ATGGTGGTGGAGTTTGACGAGGATGAGGGCAACGTCGGAGGCACGAGCAACGTCATAGGCACAGTGGCAAAGAGCCTCCTCCCACATCATTCTGGAGAGAGCCGCCGACAACTGCAAGGCTACGCGGTAGGCTCGACCTCGCCATCCTCGCCGCCGCAGGCAGAATCGGGAGCAGCAGCCGCCGGCAGCAGCGGGCTCAACCGGGAAGTCGTCGGCTCATTCCCGACCTTCGCATACTTCGCCGTGAAGTGCCACAAGATCGGGCGGGACGCGCTGGAATGCGCCGTGTGCCTCATCGAGTTCCGCGACTACGAAACACTGCGTTTGATCCCCGATTGCTACCACGTGTTCCACCCGGACTACATCGACGTCTGGCTCTCCACTCACTCCACGTGCCCCGTTTGCCGCGCAAACCTCGTGCCAATACCCGGTGACGCGTCATCATCATCCCTCGCGATCAACGTCTTCGATCAACCCGACCCGGAACCAAATAACAACGGCTCGAATCTCGATTCTCGGGTCAACGACGATGACCGAAATAGAGTAATATTATTAACAGAGTCCGAGTCCCACCTAGAGAGGAGTACTAGTTTGGATGATGAGAGCCATTCGGTTCGGTCGTTTCGGCATTTTAACTCGATGGGTCACTCACCGGTTCGAGCGGAGGAGGACTCGGAGCATTTCACGCTGAGGCTGCCGGAGGGGGGTTGCGGAACCAACTTGTGA | 726 | 0.584 | MVVEFDEDEGNVGGTSNVIGTVAKSLLPHHSGESRRQLQGYAVGSTSPSSPPQAESGAAAAGSSGLNREVVGSFPTFAYFAVKCHKIGRDALECAVCLIEFRDYETLRLIPDCYHVFHPDYIDVWLSTHSTCPVCRANLVPIPGDASSSSLAINVFDQPDPEPNNNGSNLDSRVNDDDRNRVILLTESESHLERSTSLDDESHSVRSFRHFNSMGHSPVRAEEDSEHFTLRLPEGGCGTNL* | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod08g1226 | 241 | MobiDBLite | consensus disorder prediction | 154 | 171 | - | - | |
Dod08g1226 | 241 | PANTHER | RING FINGER DOMAIN-CONTAINING | 53 | 236 | - | - | |
Dod08g1226 | 241 | PANTHER | RING-H2 FINGER PROTEIN ATL11 | 53 | 236 | - | - | |
Dod08g1226 | 241 | SUPERFAMILY | RING/U-box | 88 | 147 | - | - | |
Dod08g1226 | 241 | MobiDBLite | consensus disorder prediction | 40 | 61 | - | - | |
Dod08g1226 | 241 | Pfam | Ring finger domain | 93 | 136 | IPR001841 | - | |
Dod08g1226 | 241 | MobiDBLite | consensus disorder prediction | 215 | 241 | - | - | |
Dod08g1226 | 241 | MobiDBLite | consensus disorder prediction | 216 | 230 | - | - | |
Dod08g1226 | 241 | MobiDBLite | consensus disorder prediction | 154 | 175 | - | - | |
Dod08g1226 | 241 | MobiDBLite | consensus disorder prediction | 40 | 57 | - | - | |
Dod08g1226 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 54 | 141 | IPR013083 | - | |
Dod08g1226 | 241 | ProSiteProfiles | Zinc finger RING-type profile. | 94 | 136 | IPR001841 | - | |
Dod08g1226 | 241 | CDD | RING-H2_PA-TM-RING | 93 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod08g1226 | Dod-Chr8 | 16592921 | 16594529 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod08g1226 | 39 | 234 | C3H Transcription Factor Family | AT2G34990 | 40.102 | 7.91e-36 | 127 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod08g1226 | K10664 | - | sspl:121775559 | 151.754 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod08g1226 | 08 | 16592921 | 16594529 | Dod08g1226 | 08 | 16592921 | 16594529 | ECH | |
Dod08g1226 | 08 | 16592921 | 16594529 | Dod09g1259 | 09 | 33705036 | 33706193 | PCT |