Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1223 ATGAGAAGGTTCACGTGGTTAACGCCGTATCGGCGCCATTTGCTCTCGTCCGTGGCTTCAGAACCGCTCGCCGATAAAGGACCGTCCTTCAACAAATTCTTGTCTTTTCGCCAATCGCTTCTGCTCACGCGAGCTTTGTTCAATTTCGGTTATGGCGGCACGAAATCGGAGGAGTTTGTGATTTCCAGTATACCGTTTAGACAATGTTATATTCATGCTGCAGCATTTTCTACTTCGGTAGAACGAGACTATTATCAACTTCTTGACGTTCCTGAAAACGCCACTCAGGATGATATAAAGAAGGCGTTTCACTCGCTTGCTAAAAAGTACCATCCAGATGCAAATAAAAATAATCCATCTGCAAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACATTGAGAGATTCTAAAAAGAGGGCACAGTATGACAAGATGCGTAGTCGCAGTTCACAGAACATAGAATATGATGTTGATGATACAGAAGAAAGGTTTAGAAATGCTTATCGCTCTCATTTTTCTGACTCATTTCATACAGTATTCTCTGAGATATTTGAAGAAGCAACAACACATTTCTCATCAAATATAGAGGTGGAGTTGTCTCTTACTTTCTCAGAAGCTGCAAGAGGGTGCACAAAACATGTGTCCTTTGATGCATTTGTTCCCTGTGATTATTGTGATGGGCGAGGGTATCCACTAGATGCCAAGGCAAGAGTTTGTCCAACATGCAGGGGCTTAGGTCGAGTTACAATCCCTCCTTTTACATCAACATGCATTACTTGTAAAGGATCAGGCCGTGTCATTAAGGACTTTTGTAATTCGTGTAGAGGATCTGGGGTGGTTGAGGGGATTAAAGAGGTTAAAGTTACAATACCAGCAGGTGTGGATACTGGAGATACAATCCATGTGCCAGAAGCTGGGAATGCTGCTGGTAGTGGAGGTCAACCTGGAAGTTTATACATTAAAATAAAGGTGGCTGAGGATTCAGTCTTTGTAAGAGATGGTGCAGATATCTATGTGGAATCTAATATTAGCTTTACACAGGCTATACTTGGTGGCAAAGTTGAGGTGCCTACTTTATCAGGGAAGATGCAAGTAAAAATACCTAAGGGTGTTCAACCAGGGCAGCTTCTGGCATTAAGAGGAAAAGGACTACCAAAGCATGGTTATCTAGTACACCATGGGGATCAGTATGTGCGTTTCCGTATTAACTTTCCCACTGAAATTAACGAAAGACAACGTGCTATACTTGAGGAACTAGCAAAGGAGGAAATAAAGGAAGGAAACAGCTCATCATTTGAAGGAAATTGGTGGCAGCAAATTCTTGAACACTTGACTGGTCCACAGTTTGTGCTGCAACTATCTGTGCTGATCTTAATCCTTGTCTTCATTAACAAAATGTTGAGCTGA 1413 0.4176 MRRFTWLTPYRRHLLSSVASEPLADKGPSFNKFLSFRQSLLLTRALFNFGYGGTKSEEFVISSIPFRQCYIHAAAFSTSVERDYYQLLDVPENATQDDIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQYDKMRSRSSQNIEYDVDDTEERFRNAYRSHFSDSFHTVFSEIFEEATTHFSSNIEVELSLTFSEAARGCTKHVSFDAFVPCDYCDGRGYPLDAKARVCPTCRGLGRVTIPPFTSTCITCKGSGRVIKDFCNSCRGSGVVEGIKEVKVTIPAGVDTGDTIHVPEAGNAAGSGGQPGSLYIKIKVAEDSVFVRDGADIYVESNISFTQAILGGKVEVPTLSGKMQVKIPKGVQPGQLLALRGKGLPKHGYLVHHGDQYVRFRINFPTEINERQRAILEELAKEEIKEGNSSSFEGNWWQQILEHLTGPQFVLQLSVLILILVFINKMLS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1223 470 Gene3D - 195 325 - -
Dod08g1223 470 Pfam DnaJ C terminal domain 197 407 IPR002939 -
Dod08g1223 470 CDD DnaJ_zf 224 280 IPR001305 GO:0031072|GO:0051082
Dod08g1223 470 Pfam DnaJ central domain 224 280 IPR001305 GO:0031072|GO:0051082
Dod08g1223 470 PRINTS DnaJ domain signature 103 118 IPR001623 -
Dod08g1223 470 PRINTS DnaJ domain signature 85 103 IPR001623 -
Dod08g1223 470 PRINTS DnaJ domain signature 140 159 IPR001623 -
Dod08g1223 470 PRINTS DnaJ domain signature 120 140 IPR001623 -
Dod08g1223 470 ProSiteProfiles Zinc finger CR-type profile. 211 285 IPR001305 GO:0031072|GO:0051082
Dod08g1223 470 Gene3D - 327 435 - -
Dod08g1223 470 Gene3D - 220 253 - -
Dod08g1223 470 Gene3D - 254 287 - -
Dod08g1223 470 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Dod08g1223 470 SUPERFAMILY Chaperone J-domain 81 183 IPR036869 -
Dod08g1223 470 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 282 IPR036410 -
Dod08g1223 470 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 418 IPR008971 GO:0006457|GO:0051082
Dod08g1223 470 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 35 448 - -
Dod08g1223 470 Pfam DnaJ domain 83 145 IPR001623 -
Dod08g1223 470 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 35 448 - -
Dod08g1223 470 SUPERFAMILY HSP40/DnaJ peptide-binding domain 196 327 IPR008971 GO:0006457|GO:0051082
Dod08g1223 470 Hamap Chaperone protein DnaJ [dnaJ]. 80 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dod08g1223 470 CDD DnaJ_C 195 410 - -
Dod08g1223 470 Gene3D DnaJ domain 79 194 IPR036869 -
Dod08g1223 470 SMART dnaj_3 82 140 IPR001623 -
Dod08g1223 470 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Dod08g1223 470 CDD DnaJ 83 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1223 Dod-Chr8 16468469 16482353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1223 74 150 C2H2 Transcription Factor Family AT1G74250 35.366 2.37e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1223 - - aip:107622493 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1223 08 16468469 16482353 Dod08g1223 08 16468469 16482353 ECH