Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1215 ATGGGAGAAGACTGTGGAACCTGGTTACCGCAGCTACATTTTAATTGGCAATCACTCAATTTGAGTTCCTTTGGTGCTCCCCTTGATATGGGGAAGCAAAATGGCATTTCTGCTGCCATGAATCCCGGCATCAATATGGCCACAAGAAATGAGACAATGCCGGCATTTGCGTCTCCTGCACTACCTCATTTGCAGTGGGGACATTCTAATGCACCTCATGGCTGGTTTTATTGTTTTCCTCGCTTTCGACAGGGTTTTACACCTGTTCCAAACTTGACTGCTGAAGAGAAACTTCCTTCTGAACAGGTGAAAAGTTTTAGGGAGCAAATTACGCCCAATGGGGAATCGGGAGCCCTGCAGAAGCAATTCCTGGTTGTTGATCAAACAGGTGATCGAACAACTCTCATTTATAGTTCAAGGATAGGGAATCCTGTTGAGTGCCTTGCTTGGGATTCAAAACTGCATGGTTCTAACAACTTGAATGAGAATGAGCCTTACTTTCGAAGAGATTTGAATTTGAATCATATGGTTGGACCAACTTTTGACGATAAGGTTGATGAAAATCAGGGCACTGACACTGAAAGTGAGATGCACGAAGACACAGAAGAAATCAATGCATTGCTCTATTCAGACAGTGATGGTTATTCTACTGAGGATGATGAAGTTACAAGCACTGGCCATTCCCCTAGTACCATGACCACTCACGAAAACCCAGAACCAATGAGGGAAACTGCGGAAGAAGTTGGTAGTTCATATGGAAAAACAAAGAAGCGGAAGCTATTCGATGAGGCTTATGATGACACGCAGATCATGGATACTGCAAGTTCTCTTAATCCTAACAGACCCTTTGACATGGGGGATGATGATGCAGAATCAAGATGCTCTAGTGGCAGCAACAGTCAAGGGGTAGATGAAATGAGTTCTTTGTTAGGCAATAAGAAGATGAGAAAGGAGAAGATACAAGATGTTCTAAGCGTTCTGCAGTGCATGATTCCTGGTGGAAAGGACAAGGAACCTGTTGAGCTTCTCGATGAAGCCATTCGTTGCTTGAAATCATTGAAACACAAGGCTAGAGCTCTTGGACTCGATGCCTTCCAAGCTGGTGAATTCTAA 1113 0.4385 MGEDCGTWLPQLHFNWQSLNLSSFGAPLDMGKQNGISAAMNPGINMATRNETMPAFASPALPHLQWGHSNAPHGWFYCFPRFRQGFTPVPNLTAEEKLPSEQVKSFREQITPNGESGALQKQFLVVDQTGDRTTLIYSSRIGNPVECLAWDSKLHGSNNLNENEPYFRRDLNLNHMVGPTFDDKVDENQGTDTESEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTMTTHENPEPMRETAEEVGSSYGKTKKRKLFDEAYDDTQIMDTASSLNPNRPFDMGDDDAESRCSSGSNSQGVDEMSSLLGNKKMRKEKIQDVLSVLQCMIPGGKDKEPVELLDEAIRCLKSLKHKARALGLDAFQAGEF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1215 370 MobiDBLite consensus disorder prediction 292 306 - -
Dod08g1215 370 MobiDBLite consensus disorder prediction 212 243 - -
Dod08g1215 370 PANTHER TRANSCRIPTION FACTOR BHLH145 1 363 - -
Dod08g1215 370 MobiDBLite consensus disorder prediction 273 306 - -
Dod08g1215 370 MobiDBLite consensus disorder prediction 219 238 - -
Dod08g1215 370 PANTHER TRANSCRIPTION FACTOR BHLH145 1 363 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1215 Dod-Chr8 16346740 16347852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1215 74 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.180 2.48e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1215 - - gmx:100812109 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1215 08 16346740 16347852 Dod08g1215 08 16346740 16347852 ECH
Dod08g1215 08 16346740 16347852 Dod09g1237 09 33444490 33445584 PCT