Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1211 ATGATGTGGGGATGGGACACCTTCGACGACACCGTTCCCCAACACGACCACCAACCCGACACCGATTCCTACCTCAATTTCGATTTCTTCTCTGCTCTCTCCAAGCCCAAGGATTATTATAAGATATTGGAAGTGGATTATGATGCCACGGATGATACTATTCGTTCCAATTACATTCGTCTAGCTCTGAAATGGCACCCCGACAAGCAGAAAGACCAGGATGCTGCCACCACAAGATTCCAAGAGATAAACGAGGCCTATCAGGTTTTGAGTGATCCTGTCAAAAGGAGAGAATATGACAAGAATGGGATGCTTTACTCCTATGATTACGATATCATTGATTATCTTAACCGTTACAAGGGCCTTATATTGACTTGCAATGGCCTCGGCATGAAGCATTCAATATGGTAA 411 0.4428 MMWGWDTFDDTVPQHDHQPDTDSYLNFDFFSALSKPKDYYKILEVDYDATDDTIRSNYIRLALKWHPDKQKDQDAATTRFQEINEAYQVLSDPVKRREYDKNGMLYSYDYDIIDYLNRYKGLILTCNGLGMKHSIW* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1211 136 CDD DnaJ 38 92 IPR001623 -
Dod08g1211 136 Gene3D DnaJ domain 30 112 IPR036869 -
Dod08g1211 136 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 136 - -
Dod08g1211 136 Pfam DnaJ domain 38 100 IPR001623 -
Dod08g1211 136 ProSiteProfiles dnaJ domain profile. 38 103 IPR001623 -
Dod08g1211 136 SMART dnaj_3 37 95 IPR001623 -
Dod08g1211 136 SUPERFAMILY Chaperone J-domain 34 122 IPR036869 -
Dod08g1211 136 ProSitePatterns Nt-dnaJ domain signature. 80 99 IPR018253 -
Dod08g1211 136 PRINTS DnaJ domain signature 58 73 IPR001623 -
Dod08g1211 136 PRINTS DnaJ domain signature 40 58 IPR001623 -
Dod08g1211 136 PRINTS DnaJ domain signature 75 95 IPR001623 -
Dod08g1211 136 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1211 Dod-Chr8 16196645 16203645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1211 31 102 C2H2 Transcription Factor Family AT1G74250 41.558 4.33e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1211 - - var:108338470 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1211 08 16196645 16203645 Dod08g1211 08 16196645 16203645 ECH