Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1203 ATGTTCTCGAAGTTTCATCAACAACAACAACAACAACAACAACAACCTCAGTCTCAACAACATCAACACCCTTTCCCACTCTCCCGAGAATGCCAAACTTCCGAAGATGATGAGAGCCGAAGCAGCGGCGGGCCCACTCCCCCGTCGGCACAAAAGCCCACCTCGACTGACGGCGCAACCATCGAGGTCGTGAGGCGGCCCAGGGGCCGCCCACCAGGGTCCAAAAACAAGCCCAAGCAGCCGCTAATAATAACCCGCGAGCCCGACGAACCTGCCATGAGCCCATACATTCTAGAAATACCAGGCGGAAGCGACGTCGTTGAGTCCATAGCGCGTTTCACACGCAGAAAGAACACGGGCCTGTGCGTCCTCACAGGTTCCGGAACCGTCGCTAACGTCACTCTCCGGCAACCCTCCGCCACCCCCGGCGCCATCGTCACGTTCCACGGCCGATTCGACATACTCTCGATCTCCGCCACGTTCGTCCCCCAGGCCCCGCCGCCAGTGGTTCCGAACGGGTTCTCGATCTCGCTGGCCGGACCTCAGGGGCAGATCGTCGGAGGACTCGTCGCCGGCAGGCTGATCGCCGCCGGGACGGTGTTCGTGATCGCCGCGTCGTTTAACAACCCGTCGTACCACAGGCTGCTGTCGGCGGAGGAGGAGGACGCGAGGAACAGCTCCGTCGGTGGCGGTGGCGGAGGCAGCGGAGAGGTGCAGTCTCCGCCTGTTTCGGCGGCTCCTGAGAGCGGCGGACATGTGGCGGGTGGGGAGTCGTGTGGGATTGGCATGTACAGCTGTCACCTTCCGTCTGATGTGATTTGGGCTTCCACAGCAAGACCACCACCACCACCGTTTTGA 858 0.6154 MFSKFHQQQQQQQQQPQSQQHQHPFPLSRECQTSEDDESRSSGGPTPPSAQKPTSTDGATIEVVRRPRGRPPGSKNKPKQPLIITREPDEPAMSPYILEIPGGSDVVESIARFTRRKNTGLCVLTGSGTVANVTLRQPSATPGAIVTFHGRFDILSISATFVPQAPPPVVPNGFSISLAGPQGQIVGGLVAGRLIAAGTVFVIAASFNNPSYHRLLSAEEEDARNSSVGGGGGGSGEVQSPPVSAAPESGGHVAGGESCGIGMYSCHLPSDVIWASTARPPPPPF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1203 285 PIRSF ESCAROLA 2 281 IPR014476 GO:0003680
Dod08g1203 285 ProSiteProfiles PPC domain profile profile. 90 229 IPR005175 -
Dod08g1203 285 MobiDBLite consensus disorder prediction 1 90 - -
Dod08g1203 285 Gene3D - 94 225 - -
Dod08g1203 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 7 284 - -
Dod08g1203 285 MobiDBLite consensus disorder prediction 223 252 - -
Dod08g1203 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 220 - -
Dod08g1203 285 MobiDBLite consensus disorder prediction 38 58 - -
Dod08g1203 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 284 IPR014476 GO:0003680
Dod08g1203 285 MobiDBLite consensus disorder prediction 1 29 - -
Dod08g1203 285 CDD DUF296 95 207 IPR005175 -
Dod08g1203 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 209 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1203 Dod-Chr8 16027411 16028821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1203 55 283 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 64.979 4.22e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1203 - - gmx:100811053 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1203 08 16027411 16028821 Dod08g1203 08 16027411 16028821 ECH