LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod08g1202	ATGTCATTCAACTTCACCAAATTGGATTTCAAGCAATTTCCCTTTGTCGAGAACCTGCAGCCTGAACTACTAGGTGGCGCATTTGCGCTTGTTGCCGTAGGTCTTACCGCTGCCTATATTTACTTTCGCACAAAAGCCCGCAAAGGCTGCTTGGACCCGAACAACTTCAAAGAATTCGCACTAATAAAGAAGGCCCAGCTCAGCCACAACGTTGCACGATTCAAATTTGCCCTTCCAACCCCTACATCTGTATTGGGTCTTCCTGTTGGAAAAAACATTCTTGCGAGGGGAAGAGACAGCCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAATTAGTTGTTAAGATGTACCCAAATGGAAGGATGTCGCACCATTTTAGACAAATGAAAGAAGGTGACTACTTGGCCGTGAAGGGCCCCAAGGGACGATTCAGTTACAAGCCTCGCCAAGTTAGGGCATTTGGAATGCTTGCTGGAGGTTCTGGCATTACCCCAATGTTTCAGCTCATAAGAGCCATACTACAAAACCCTAAAGACAAAACAAAGTTGCATCTTTTATACGCCAATGTGACGGTGGACGACATTCTGTTAAAGGAAGAGCTAGATAGCTTTGCAAACAAATTTCCTGACCGATTCAAAGTCGATTATGTTCTTAGTAAGCCCCCTAATTCATGGAATGGTGGTGTTGGGTATATATCCAAGGAGATGATTCAAACCCATTGTCCTGCACCAGCTCCAGACATCCAGATACTTAGGTGCGGTCCACCACCAATGAATAAAGCCATGGCAACTCACCTTGATGCACTTGGGTACACATCAGACATGCAATTCGAGTTCTAG	873	0.4479	MSFNFTKLDFKQFPFVENLQPELLGGAFALVAVGLTAAYIYFRTKARKGCLDPNNFKEFALIKKAQLSHNVARFKFALPTPTSVLGLPVGKNILARGRDSQGEEVMRSYTPITLDSDIGYFELVVKMYPNGRMSHHFRQMKEGDYLAVKGPKGRFSYKPRQVRAFGMLAGGSGITPMFQLIRAILQNPKDKTKLHLLYANVTVDDILLKEELDSFANKFPDRFKVDYVLSKPPNSWNGGVGYISKEMIQTHCPAPAPDIQILRCGPPPMNKAMATHLDALGYTSDMQFEF*	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod08g1202	290	CDD	cyt_b5_reduct_like	59	290	-	-
	Dod08g1202	290	PRINTS	Cytochrome B5 reductase signature	143	157	-	-
	Dod08g1202	290	PRINTS	Cytochrome B5 reductase signature	260	268	-	-
	Dod08g1202	290	PRINTS	Cytochrome B5 reductase signature	85	96	-	-
	Dod08g1202	290	PRINTS	Cytochrome B5 reductase signature	204	215	-	-
	Dod08g1202	290	PRINTS	Cytochrome B5 reductase signature	166	185	-	-
	Dod08g1202	290	PRINTS	Cytochrome B5 reductase signature	107	114	-	-
	Dod08g1202	290	Pfam	Oxidoreductase NAD-binding domain	167	273	IPR001433	GO:0016491
	Dod08g1202	290	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	2	290	IPR001834	GO:0016491
	Dod08g1202	290	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	2	290	-	-
	Dod08g1202	290	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	54	158	IPR017927	GO:0016491
	Dod08g1202	290	Gene3D	-	150	287	IPR039261	-
	Dod08g1202	290	Pfam	Oxidoreductase FAD-binding domain	59	157	IPR008333	-
	Dod08g1202	290	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	166	185	IPR001709	GO:0016491
	Dod08g1202	290	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	260	268	IPR001709	GO:0016491
	Dod08g1202	290	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	204	215	IPR001709	GO:0016491
	Dod08g1202	290	SUPERFAMILY	Riboflavin synthase domain-like	48	159	IPR017938	-
	Dod08g1202	290	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	146	285	IPR039261	-
	Dod08g1202	290	Gene3D	Translation factors	49	149	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod08g1202	Dod-Chr8	15997943	16003789	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod08g1202	39	290	NADPH P450 reductases	AT5G17770	70.635	2.38e-140	395

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod08g1202	K00326		-	gmx:100784114	504.212