Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1201 ATGCCATTCAACTTCACCAAATGGGATTTCAAGCAATTTCCCTTTGTCGAGAACCTGAAGCCTGAACTGCTAGGAGTTGCATTTGCGCTTGTTGCCGTAGGTCTTACCGCTGCCTATATTTACTTTCGCACAAAAGCCCGCAAAGTGATGATGGTTGATACGGGTTCTGTGTCAAGAAGGGCTGGACCCCTTGTTGATGTGATGCCAGCAGAGCAAGATGATGATGGCCGGTTTGCCTGCGGAGGGTCGACAAGGCTTAGCTATGGGTATTCAAGTTTTGGAGGGAGGAGAGAGACAATGGAGGATTTTTACGACATTAAAACACTGAAGATTGGTGGTCATTCAGTATGTTTATTTGGAATATTTGATGGTGAAACGTATCAGCAGACTGATGATGATTTTCTGGATTCTGAAAAGGATAGGGACGATGGTTCTACTGCTTCAACAGCAGTTTTGGTTGATAACCATCTTTATGTAGCTAATGTTGGAGATTCTAGGACTATAATATCGAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAACAGAAGCGATGAACGAGAGAGAATTAAGAATGCCGGGGGTGTTGTCACGTTGGACGGTGAGGGAGTTGAGAATGGCGAGGGTGCTGTCATGTGGGAAGGTACTTGGAGGGTAGAAGGTGACCTAGCAATGTCTCGTGCCTTCGGTGATCGTACGTTGAAGGACCTTGTTGTTGCAGAACCTGAGATCCAGGTGATCCTTCATTATCTGTGCAATCTCAAAGTTATCTAA 783 0.4521 MPFNFTKWDFKQFPFVENLKPELLGVAFALVAVGLTAAYIYFRTKARKVMMVDTGSVSRRAGPLVDVMPAEQDDDGRFACGGSTRLSYGYSSFGGRRETMEDFYDIKTLKIGGHSVCLFGIFDGETYQQTDDDFLDSEKDRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERERIKNAGGVVTLDGEGVENGEGAVMWEGTWRVEGDLAMSRAFGDRTLKDLVVAEPEIQVILHYLCNLKVI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1201 260 Gene3D - 80 253 IPR036457 -
Dod08g1201 260 ProSiteProfiles PPM-type phosphatase domain profile. 87 260 IPR001932 -
Dod08g1201 260 SMART PP2C_4 77 260 IPR001932 -
Dod08g1201 260 Pfam Protein phosphatase 2C 126 249 IPR001932 -
Dod08g1201 260 PANTHER ALPHABET, ISOFORM E-RELATED 207 248 - -
Dod08g1201 260 PANTHER ALPHABET, ISOFORM E-RELATED 48 124 - -
Dod08g1201 260 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 125 201 - -
Dod08g1201 260 CDD PP2Cc 87 250 IPR001932 -
Dod08g1201 260 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 207 248 - -
Dod08g1201 260 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 48 124 - -
Dod08g1201 260 PANTHER ALPHABET, ISOFORM E-RELATED 125 201 - -
Dod08g1201 260 SUPERFAMILY PP2C-like 82 251 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1201 Dod-Chr8 15950170 15954709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1201 15 248 PP2C-type Phosphatase Gene Family AT5G53140 53.285 9.27e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1201 K17506 - gmx:100813138 272.707