Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1197 ATGCAGACAGCAACTCGAGCTGAAGCCGAGCGCCTGCTGGGGATCGCAGAGAAGCTCCTCCAATCCCGCGATCTGAACGGCTCCCGCGAGTTCGCCGTCCTTGCACAGGAAACCGAGCCCCTTCTAGAAGGTTCCGACCAGATCCTAGCCATCGTCGACGTCCTCCTCGCCGCCGACAAGCGCCCCAACACCCCCGCCGCCACCCACCACCACCAGCAGCCGGACTGGTACGGCGTCCTCCAAGTCGACCGCCGCACCACCGACCTCGACCTCATCAAGCGCCACTACCGCCGCCTCGCCCTCCTCCTCCACCCCGACAAGAGCCGCTTCGCCTACGCCGACCACGCCTTCAAGCTCGTCGCCGACGCCTGGGCCGTCCTCTCCGACCCAATCAAGAAATCCAACTACGACAAGGAGCTCTCCTTCTTCTCCCGTGTCGACCTCTCCGTCCCCGGCTGGGTCCAGCAGGAGAAACTACCCGTCCGTAGGACCGGGCCTGGGCCCGGGCCCAACCCTGGCCCAAGCGCGAGGAACAACTTGAGCTACGACTCAATGAACATTGGCATCAACAACACCCCCGCTTCCGCCGCGAGGAACGAGATCGCGGCGGATGAGAACTCGAACCCTAGGCAGCAGCGTAGATCGGGGACGTTCTGGACCGCGTGTCCTTACTGTTACAGGCTCTACGAGTACCCGAGGGTTTACGAGGGTTGCTGCTTGAGGTGCCAGAATTGCGAGAGGTCGTTCCATGGGATCTCGATTCCTTCGCTTCCGCCTCTGGTGCCGGGGCAGGACGCTTATTATTGCTGCTGGGGGTTCTTTCCGATGGGGTTTGTGGTCGGGAGCGTTGGATTCGCAGAGAAAGAGGCTGCTCCTGCGGAGCCAGTGACGGCGGCTCCGCCGCCGCAGCAGCCTGCGTCCGCTCTGCCGAATTGGATGCCTGCGCCGTCCGCTGCGGCGCAGGTGAATGGGGGAAATGGTGCTGCCCCGGTTGTGGCGGCGACTCCCGCGAGGGGGGCTACCAGGGGAAGTGGCGTTTCGAATGGAGTTGCTTTGGGGTCGGGATCTGGTCCGAAGAAGCGAGGGAGGCCGCGGAAGTATCCATTGCAGTCGTGA 1116 0.638 MQTATRAEAERLLGIAEKLLQSRDLNGSREFAVLAQETEPLLEGSDQILAIVDVLLAADKRPNTPAATHHHQQPDWYGVLQVDRRTTDLDLIKRHYRRLALLLHPDKSRFAYADHAFKLVADAWAVLSDPIKKSNYDKELSFFSRVDLSVPGWVQQEKLPVRRTGPGPGPNPGPSARNNLSYDSMNIGINNTPASAARNEIAADENSNPRQQRRSGTFWTACPYCYRLYEYPRVYEGCCLRCQNCERSFHGISIPSLPPLVPGQDAYYCCWGFFPMGFVVGSVGFAEKEAAPAEPVTAAPPPQQPASALPNWMPAPSAAAQVNGGNGAAPVVAATPARGATRGSGVSNGVALGSGSGPKKRGRPRKYPLQS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1197 371 Pfam DnaJ domain 75 137 IPR001623 -
Dod08g1197 371 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Dod08g1197 371 Gene3D DnaJ domain 60 147 IPR036869 -
Dod08g1197 371 MobiDBLite consensus disorder prediction 295 309 - -
Dod08g1197 371 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 366 - -
Dod08g1197 371 SUPERFAMILY Chaperone J-domain 69 140 IPR036869 -
Dod08g1197 371 ProSiteProfiles dnaJ domain profile. 75 140 IPR001623 -
Dod08g1197 371 MobiDBLite consensus disorder prediction 157 180 - -
Dod08g1197 371 MobiDBLite consensus disorder prediction 294 371 - -
Dod08g1197 371 CDD DnaJ 75 129 IPR001623 -
Dod08g1197 371 PRINTS DnaJ domain signature 96 111 IPR001623 -
Dod08g1197 371 PRINTS DnaJ domain signature 112 132 IPR001623 -
Dod08g1197 371 PRINTS DnaJ domain signature 77 95 IPR001623 -
Dod08g1197 371 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 366 - -
Dod08g1197 371 SMART dnaj_3 74 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1197 Dod-Chr8 15843510 15845828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1197 5 369 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.791 1.42e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1197 - - adu:107459359 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1197 08 15843510 15845828 Dod08g1197 08 15843510 15845828 ECH