Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1191 ATGTCTTGTGTTGAAAGGGCTGCACAAGAGGTCACAACAAGTCACACCCTTGGGGACAAGGAGGTGCAACTGCCATGCCTCATGTGGCTCCCACATTGTTTTTTTTTTTTGGAAATTGAAGATCGTGTTAGGCTTGCCCTCGCCAAACTGAACCTCGTAGCTCATGATCCTTGCCACGTCAGTGGCGAAGTTGTCGTGGACCATAATGGCGATCGGGATGCGGCACTTGCCGACGAGCTTTTCACCGAGGAGGACGCCATCATGGTGGAACTCGAACTGGAAGAAGAGTTTGCTGCTACTTCTACTCTTCCTTCATTTTTGCTTTTGGGTCATTGTTGGAGATGGAGACGAGGGGAAAACTCGTCTATATGGAGGAGGTATCCATACCCTTATAAGGTATGCTTCGTTTCCATCTCCAACCAATATGGGACTAGTTTCACCCCTTCTAGTGGGGGCCCAGCATCCTCGCTAGCTAGCACAATGATCCCAGGGGAAGGAGGGGGAGGGCATCCAAGACACCATAAAGCATCAAATAAAAGTTCTCCCTACCTCTTGGCTATAGAACTCATGCAAAGAGGGGGAGGGGGTCATGGAAGGCTAGTTGATCCTCTGATAGAAAGGCAAGAGGATGCAATTACATACTCCAGCAACAGCGGTGGCGGCTTCAACAGCAATGGAGAGGGGTGGTCGGCAGAGGAGAAGGAAAGTGAGAAGGAGAAGTATGATGCAAGCACATGTTTAACGTTGCTTCAAGAAATGGCAAATTATCCGGATTCGAAGTTTGATTGGAACAAGTTGGTCAAAGAAACCTCAACTGGTATTTCTAATGCCAGGGAATATCAAATGTTGTGGCGTCATTTGGCTTACGGTCACGCCTTGGAAGAAAATTTAGATGACAATGCTCAACCTCTTGATGATGATAGTGACCTTGAGCGTGAACAGGAAGCACCATCCTCCATAACTGAGCAAACTGCATCGGAGACAGCGGCTTGTGTGAAGGTAATGACCGATTCTCATAAGCTAGATGAATGCCCCCCAACTAGTTCACTTATAATGGCTCCATTGACTATAAGTGTTCCAGTATGTGGTTCATCTGCAACCCCTAATGAATGTTCACAAGCCTCTAATTTGATGCAAGAGAAAAGCATTATTTTTCCAATTACTGTTCCGAGGAAGACATTACCAAATAGAAAAATTAGAGGACCAGGTAGCAGCAACAACATAGCTCCTACAAAAAAAGGAAAGTTGTGGTCAGAGGAAGAGGACATGTTGCTACTAGCTTCAGTTGAGAAATGGGGTGAAGGGAATTGGACATACATGGCTAAAAGAGATGACTTTCCTCTTGATAGAACTGCATCACAATTATCTAAGAGGTGGAGCACTTTGCGAAGGAAACATGGCAGCACCAGATCAGGAACCATCCCATCAAGCTCACAATGTGAAGCGAAATAG 1452 0.4607 MSCVERAAQEVTTSHTLGDKEVQLPCLMWLPHCFFFLEIEDRVRLALAKLNLVAHDPCHVSGEVVVDHNGDRDAALADELFTEEDAIMVELELEEEFAATSTLPSFLLLGHCWRWRRGENSSIWRRYPYPYKVCFVSISNQYGTSFTPSSGGPASSLASTMIPGEGGGGHPRHHKASNKSSPYLLAIELMQRGGGGHGRLVDPLIERQEDAITYSSNSGGGFNSNGEGWSAEEKESEKEKYDASTCLTLLQEMANYPDSKFDWNKLVKETSTGISNAREYQMLWRHLAYGHALEENLDDNAQPLDDDSDLEREQEAPSSITEQTASETAACVKVMTDSHKLDECPPTSSLIMAPLTISVPVCGSSATPNECSQASNLMQEKSIIFPITVPRKTLPNRKIRGPGSSNNIAPTKKGKLWSEEEDMLLLASVEKWGEGNWTYMAKRDDFPLDRTASQLSKRWSTLRRKHGSTRSGTIPSSSQCEAK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1191 483 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 239 481 - -
Dod08g1191 483 Pfam Myb-like DNA-binding domain 417 462 IPR001005 -
Dod08g1191 483 SUPERFAMILY Homeodomain-like 412 464 IPR009057 -
Dod08g1191 483 Gene3D - 409 469 - -
Dod08g1191 483 MobiDBLite consensus disorder prediction 457 483 - -
Dod08g1191 483 CDD SANT_TRF 417 464 - -
Dod08g1191 483 MobiDBLite consensus disorder prediction 466 483 - -
Dod08g1191 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 409 467 IPR017930 -
Dod08g1191 483 MobiDBLite consensus disorder prediction 149 177 - -
Dod08g1191 483 MobiDBLite consensus disorder prediction 298 325 - -
Dod08g1191 483 MobiDBLite consensus disorder prediction 213 237 - -
Dod08g1191 483 SMART sant 413 465 IPR001005 -
Dod08g1191 483 ProSiteProfiles Myb-like domain profile. 409 463 IPR001005 -
Dod08g1191 483 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 239 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1191 Dod-Chr8 15718717 15742447 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod08g1191 Myb_DNA-binding 7.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1191 - - adu:107460964 281.567