Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1188 ATGAGAAAAACTGTACATTGCGGTCTGTCGAGAACAATGAGCGAAGAAGACAAGACTTCTGATTTTACGGGAACCAATTCGGGCTACTCAGGTTTTCTTCTTGACCCGGAGAAATGTAGTTTGCTGAATTTGCAAGAGAAACAAAGACTGGTCCATGAGATTGCTCGACTGTCAAAAGATGCCCCAAATATGCTTCGTTCCTTTACGCGCAAAGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTTAAGATAATTTCCAAGAAACCTAAGTCACATGTCATCCAAAACACTCTTGCCCACTCTCCTGCCAAAAGTTGTATTGGATCCAAAAGGAAAAAAGGACCTTCCTCTCAAGATCTACATCATGTTCCTCTGGGGAACAGTAAGGAGGAAATGGTGAAAATCTTATTGTGTCAGAATGTTGCATGCAGAGCTACCTTGAATCCAGAAGATTCTTTCTGCAAGAGATGTTCTTGTTGTATTTGTCATGGTTATGACGATAACAAGGATCCTAGTTTGTGGTTAACTTGCAGTTCTGATCATCCCAATGAGGAGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGAGCAGTTGTGGTGTAAAGTTAGATGGAAGCTTCTCTTGTATTTCTTGCGGAAAAATTAATGAGTTAATGAGGACATGGCGAAAACAATTGTTGGTTGCCAAAGAAGCAAGACGAGTGGATATACTCTCTTTGCGGATAACCTTGGCTCACAGAATTCTTATTGGAACAGAAGTATTCAAGGAAGTACAGAAGATTGTAGAAACTGCTCTCAAGTTATTGGACAATGAAGTGGGACCTCTGGATCAAGTATGTGCAAGCATGACACGGGGTATTGTGAGCAGGCTCTCATGTGGTGCGGAGGTTCAGAAGTTGTGCTTGAATGCAATTGAATGTTTTGATTCAAAATTTTCTGACCTCTTCTATAATTGTGTGGAAAAGAAAGATGCACCAACGTGCTCTATACGTTTTGAAGAGTGCCTTCCCACCTCAGTGGTCATTGTGCTTGAATATGAAGATAAACTTTTAAAGAACTTTCTAGGTTGCAGGCTTTGGCACCGAATATCAACAATGGACTACCCCGAACAACCTACCTTCATTGTTTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCACCCTTCAACTGAGTACTTCTGCAAGGCTTCTCTGTTCAGCAGCATGGGGATTTTGGGCGCCGCCGAAGCTAGATGGGTTACGCCTTGTGAGCCTGCAAATTCTCTTTCCAATGTCATTAGGCGTGGTGGCCACGATCATTCAACATGGTCACCTCAGCTATCCCCCATTGCAGCTATGTGCAAGTATGCACAGGACAAAATTAAGCCAACAGCCGAAAATCATCAGGTTGAATCTGCCAACTCTCACATAAAGTTATCCTCTGGAGACAGCATCAGGGGCAGCTTCGAAGAGTTCCTCGCCAGGCCTCCATCAATTGGACGATTTTCGCATAAGAATTTCGTTGCAGTGTCACCCACCACACCTTCCAAATCCAATGAAATGAGGCAACTTAATGCTTTTACTTCCAGGAATCGCTTGAAGGAGCACGACTACGAGCATTCGGTCAGGGTCGTCAAATGGTTAGAGCATCGCGGACACATCGATGAAACCTTCCGAATAAGGTTTCTCACTTGGTTCAGCCTCAAGGCTACACAGCAGGAGAGAAGAGTGGTTAGCGCTTTTGTTGATGCATTGATGGATGATCCAGCAAGCTTAGCTGACCAGCTGATACACACTTTCTCGGACGAGATATGTTCCGAGCAAAAACCTTAG 1902 0.4317 MRKTVHCGLSRTMSEEDKTSDFTGTNSGYSGFLLDPEKCSLLNLQEKQRLVHEIARLSKDAPNMLRSFTRKELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKPKSHVIQNTLAHSPAKSCIGSKRKKGPSSQDLHHVPLGNSKEEMVKILLCQNVACRATLNPEDSFCKRCSCCICHGYDDNKDPSLWLTCSSDHPNEESCGMSCHLQCALSNQMSGILKSSCGVKLDGSFSCISCGKINELMRTWRKQLLVAKEARRVDILSLRITLAHRILIGTEVFKEVQKIVETALKLLDNEVGPLDQVCASMTRGIVSRLSCGAEVQKLCLNAIECFDSKFSDLFYNCVEKKDAPTCSIRFEECLPTSVVIVLEYEDKLLKNFLGCRLWHRISTMDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSMGILGAAEARWVTPCEPANSLSNVIRRGGHDHSTWSPQLSPIAAMCKYAQDKIKPTAENHQVESANSHIKLSSGDSIRGSFEEFLARPPSIGRFSHKNFVAVSPTTPSKSNEMRQLNAFTSRNRLKEHDYEHSVRVVKWLEHRGHIDETFRIRFLTWFSLKATQQERRVVSAFVDALMDDPASLADQLIHTFSDEICSEQKP* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1188 633 PANTHER VIN3-LIKE PROTEIN 2-RELATED 25 633 IPR044514 GO:0010048|GO:0040029
Dod08g1188 633 MobiDBLite consensus disorder prediction 1 22 - -
Dod08g1188 633 PANTHER OS08G0220600 PROTEIN 25 633 - -
Dod08g1188 633 Pfam PHD - plant homeodomain finger protein 156 275 IPR032881 -
Dod08g1188 633 CDD PHD_VIN3_plant 176 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1188 Dod-Chr8 15559811 15567170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1188 38 631 PHD Gene Family AT5G57380 33.814 1.69e-101 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1188 - - gmx:100785502 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1188 08 15559811 15567170 Dod08g1188 08 15559811 15567170 ECH