Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1184 ATGCCTCATAGAGCCACATACATTTTCCCCAGGCAATTTCCGGAGGGAGGATTCGATGAATCTGCGAAACAGAAATTGGATCACGAGAGGAAGAAAATCGTCAATTCCATCAAATCATCTGACCATAGTACATTTGGCGTTGAAAGCGACGTGCCGAAAAAGCCATTCGGCTCAACAACAACAGCAACTGCCGCAGCAACTGTTACTCCTGACGCCAAAGACGACGTTGTTTTCCCCTCAGGGAAACATTCGGCGGTCTCGGACCTCATCGCCGGCGGCAACAGGCTCCGGAGCAAGAACAGACAAATCGCCGCGTTCTGCGATTGGTTGACCGACAAGAAGCGCGATCGCACCCGATCTGATCACCGCCGCCGGGAGGCGGAGCGAGAGCTACTGCTGCCGCCGGCGCCGGAGGGGCTCAAAGATTCCGGCGATGTTGACCGGAACTTTGACCGGCAGGTTTCGCTGCCGCGGTTGTCCAGCTGGAGCAGCTACGCGGGGAGCTTGTTTTCCGGAACGACGACGTTAGACGGAACCGCCACTTTCTCAAGCGGCATTAACACCAAAGACGAAACGTCGTCGTCTCGTGTCCCTACCGCTGCCGTATTAACAAGAAGGCACGAAGAAGAAGAAGAGCAAGAACAAGAAGGAGATCGCAGCAACAACAACGACGGTTACGCTCGGAAGTACAAAGAAGGCTACTACTTGCAAGTCACGTTAGCGAAGAGGCTCACTTGCTTAGCAAGCCTCACCACTGATCCCGCTCTCAACACCGGAATCGAAACCTGGGATGCCGAGTCCGTTTCTTATCGTCTATGGGTGAGTGGGTGCTTGTCGTACACGGACAAGATATCTGACGGTTTTTACAACATATTGGGGATGAACCCGTACCTGTGGGTGATGTGCAATGAGATGGAGGAAGGCAAGCGGTTACCGACTCTGATGGCTCTGAGAGCTGTTGAACCCAGCGATACATCGATAGAGGTGGTTCTCGTTGATAGGCACGAGGACTCTCGGCTTAAGGAGCTTCTTGATAAAGCTCAGGAGTTGTACTGTGCTTCCGAGAACGCGTTGGTGCTGGTTGAACAACTTGGGAAGCTTGTTGCCATATGCATGGGGGGAACGTTCCCGGTGGAGCAAGGGGATCTGCACAAGCGGTGGAAGTTGGTTAGTAAGAGGTTGAGGAGTTTTCATCAGTGCGTTGTGCTTCCCATCGGAAGCTTGTCCACTGGACTGTGTAGGCATCGCGCCATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGCATTGCTAGAGGTTGTAGGTACTGCGCTTCTGATCATAGATCCTCTTGTCTGGTTAAGATTAATGACGACAGCAGGCAGCTCTCAAGGGAATACGTAGTTGACTTAGTCGGGGAACCAGGAAATGTCCACGGACCAGATTCCTCAATTAATGGAGCATATTTGTCTTCGATTCCTTCTCCATTTCAAATATCTCATTTAAAAGAATGCCGATCGCCATATGTGGATGGTGAAGCATGTTCTCAATCTCTCAATTCCAATCTCAGCTCCATCATTCCTGAAAGTCGCCGGTACTTAGGCCATGTACGGGAAAGTTCACAAGGAGAAGACCTTGCTTTGCTGAAAAATAATAAGGGCTCCATTTATGCTTCAGGTGTTTCTGAGGCTTTTCATCCAGCCTCTGAAGCATCATTACGTGAATATCCCAGACTTGTTAAAGATAAGGTTGCAGTGCATGAAATTTCCAATGATGAGATTATTGCAAAGAGAAGTTCTGGTGTAAAACCCACTTCTAAGCAATCTATAAAGAGCTCATCCAACCAATCAGGACTGTTAAAGGTACATAATAGACATGAAAACCAGGGTGCTGGAAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGAATTAAAGAGCGTATTGGTGCTGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCCGTCAAGGTATTAACAGTGCAGGATTTCCATGATGATCATTTGAAAGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGTCCCCATTTATCTATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATTCCGCCTAATACATAGGCCAGCATCTGGTGAAATTCTTGATCAAAGGAGGAGATTACGGATGATTTTAGATGTGGCTAAAGGGATAAATTATCTCCACTGTCTGAAGCCTCCAATCGTGCACTGGGATCTCAAATCCCCAAACCTGTTAGTCGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTATCCAGATTTAAGGCAAACACTTTCATATCGTCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTCTTCAGTTTTGGAGTCATCATTTGGGAACTTGTGACCCTGCAACAACCATGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGGATAGAAGGCTTGCTATCCCTCCGAACATCTCCCCAGAATTGGCCTCTCTCATGGAATCTTGCTGGGCTGATAGCCCTGCTGAACGCCCATCTTTTCCTAGCATAGTCGAGTCGCTAAAGAAGCTGCTAAAGTCACCGGCGGATGCGATAAAAATGGGTGGCACATAA 2769 0.4803 MPHRATYIFPRQFPEGGFDESAKQKLDHERKKIVNSIKSSDHSTFGVESDVPKKPFGSTTTATAAATVTPDAKDDVVFPSGKHSAVSDLIAGGNRLRSKNRQIAAFCDWLTDKKRDRTRSDHRRREAERELLLPPAPEGLKDSGDVDRNFDRQVSLPRLSSWSSYAGSLFSGTTTLDGTATFSSGINTKDETSSSRVPTAAVLTRRHEEEEEQEQEGDRSNNNDGYARKYKEGYYLQVTLAKRLTCLASLTTDPALNTGIETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNEMEEGKRLPTLMALRAVEPSDTSIEVVLVDRHEDSRLKELLDKAQELYCASENALVLVEQLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRSFHQCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHRSSCLVKINDDSRQLSREYVVDLVGEPGNVHGPDSSINGAYLSSIPSPFQISHLKECRSPYVDGEACSQSLNSNLSSIIPESRRYLGHVRESSQGEDLALLKNNKGSIYASGVSEAFHPASEASLREYPRLVKDKVAVHEISNDEIIAKRSSGVKPTSKQSIKSSSNQSGLLKVHNRHENQGAGNIPRYLNLEPSLAMDWLEISWDDLRIKERIGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDHLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPASGEILDQRRRLRMILDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVFSFGVIIWELVTLQQPWSGLSPAQVVGAVAFQDRRLAIPPNISPELASLMESCWADSPAERPSFPSIVESLKKLLKSPADAIKMGGT* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1184 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Dod08g1184 922 MobiDBLite consensus disorder prediction 116 147 - -
Dod08g1184 922 MobiDBLite consensus disorder prediction 116 132 - -
Dod08g1184 922 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 204 920 - -
Dod08g1184 922 ProSitePatterns Protein kinases ATP-binding region signature. 658 679 IPR017441 GO:0005524
Dod08g1184 922 SUPERFAMILY Protein kinase-like (PK-like) 631 905 IPR011009 -
Dod08g1184 922 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 204 920 - -
Dod08g1184 922 Pfam Protein tyrosine and serine/threonine kinase 652 906 IPR001245 GO:0004672|GO:0006468
Dod08g1184 922 MobiDBLite consensus disorder prediction 594 615 - -
Dod08g1184 922 MobiDBLite consensus disorder prediction 184 225 - -
Dod08g1184 922 MobiDBLite consensus disorder prediction 184 200 - -
Dod08g1184 922 MobiDBLite consensus disorder prediction 597 615 - -
Dod08g1184 922 Pfam Ethylene-responsive protein kinase Le-CTR1 265 474 - -
Dod08g1184 922 PRINTS Tyrosine kinase catalytic domain signature 877 899 IPR001245 GO:0004672|GO:0006468
Dod08g1184 922 PRINTS Tyrosine kinase catalytic domain signature 726 739 IPR001245 GO:0004672|GO:0006468
Dod08g1184 922 PRINTS Tyrosine kinase catalytic domain signature 833 855 IPR001245 GO:0004672|GO:0006468
Dod08g1184 922 PRINTS Tyrosine kinase catalytic domain signature 767 785 IPR001245 GO:0004672|GO:0006468
Dod08g1184 922 Gene3D Transferase(Phosphotransferase) domain 1 731 918 - -
Dod08g1184 922 ProSiteProfiles Protein kinase domain profile. 652 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1184 922 MobiDBLite consensus disorder prediction 202 225 - -
Dod08g1184 922 CDD STKc_MAP3K-like 658 906 - -
Dod08g1184 922 SMART serkin_6 652 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1184 922 Gene3D Phosphorylase Kinase; domain 1 645 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1184 Dod-Chr8 15513201 15521052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1184 1 921 MAP Kinase Kinase Kinase AT4G24480 56.295 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod08g1184 PK_Tyr_Ser-Thr 3.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1184 - - aip:107609156 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1184 08 15513201 15521052 Dod08g1184 08 15513201 15521052 ECH