Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1165 ATGGAGAACAACAACAACAACAACCACTCCGTCGCCAATTCCCGCGACTCCTCGCCGCACTCTCGCGACGCCGACCACACCACCTCCTTCGACGAACAACCCCCTCCTCCTCCTCCTCCTCCTTCCTCCGCCGCCACCTACAAGGTGAAATTCATGTGCAGCTACGGCGGAAGGATCCAGCCCCGCCCGCACGACAACCAGCTCTCCTACATCGGCGGCGACACAAAGATCCTCGCCGTCGACCGTCACATCAGGTTCGCCGCACTCGCCGCCAAGCTCTCCTCCCTGACCGGCGGCGGCGCCGACGTCTGCTTCAAGTACCAGCTCCCCGGCGAGGACCTCGACGCCCTCATCTCCGTCACCAACGACGAGGACCTCGACCATATGATGGTCGAGTACGATCGCCTGTGCCGCTCCTCACCTAGACCCGCACGCCTCAGGCTCATCCTATTCCCTCTCCCAAACAACAGCAACAACAACAACAATGCTTCTCTTCCTCCACCACCTCCTCCTCCTTCACTTTTAACCAAACCCGAAGGTCACTGGTTCGTTGAAGCTCTCAATTCCGTTCAGCTTCCAGAACCTTCTATTTCTCCTTCTCCTCCTCAGCAACTGCCTCCGCCTGTCGCTGCGCTAAATCCGGATTTTCTGTTCGGATTGGATAAACCGCGTCCCGCGGTATCCGCGGATCCCTCTCCCGCCGCTCCAACGGTTCCGGATTTCGCGGCGGGAGGTTCGGACTGCGGCCCCGAGGCCGTTACGGAAACCGAAATCGTTAGGCTGCACCTCGGGAACAACGAACAGCAACAACAACAACAGCAGCAACGGAAAAGCGATGAGGATGACGGCAGAGTTAACGGCGTGGAGTTTTACTCACAGAAGAATGCTGAGAATGCGGTTCATTCAGTTGCGCAAGTTCATTCCTGTCCGGTTCATGTTTCTGGACCGGTTCCTGTCCATGTTCCAGGGTCGTTGTTGCATAACCCGGTTCGTGTTTCTGGAACTGGAGTGGAGCCGGTGCCGGTTTATCTCATTCAGACTCCGTCGGGGATCTACCAGGCGGTGAGATCGGTGACTGGACCGATGGGTCCCGCGCCGGTTTATCTGATTCAGGCGCCGGCGGCGGTTTCGCATCCGGCGCAGAAGGTTGGTTACGGCGGTACAGAGGTTGCGTATGCGGTGCCGCGGCAGGCCGCCTCGGCCCCCGGCGGTGACGCGTGGAACTGA 1227 0.5933 MENNNNNNHSVANSRDSSPHSRDADHTTSFDEQPPPPPPPPSSAATYKVKFMCSYGGRIQPRPHDNQLSYIGGDTKILAVDRHIRFAALAAKLSSLTGGGADVCFKYQLPGEDLDALISVTNDEDLDHMMVEYDRLCRSSPRPARLRLILFPLPNNSNNNNNASLPPPPPPPSLLTKPEGHWFVEALNSVQLPEPSISPSPPQQLPPPVAALNPDFLFGLDKPRPAVSADPSPAAPTVPDFAAGGSDCGPEAVTETEIVRLHLGNNEQQQQQQQQRKSDEDDGRVNGVEFYSQKNAENAVHSVAQVHSCPVHVSGPVPVHVPGSLLHNPVRVSGTGVEPVPVYLIQTPSGIYQAVRSVTGPMGPAPVYLIQAPAAVSHPAQKVGYGGTEVAYAVPRQAASAPGGDAWN* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1165 408 Gene3D - 69 152 - -
Dod08g1165 408 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 6 372 - -
Dod08g1165 408 SUPERFAMILY CAD & PB1 domains 64 160 - -
Dod08g1165 408 MobiDBLite consensus disorder prediction 1 15 - -
Dod08g1165 408 Pfam PB1 domain 64 152 IPR000270 GO:0005515
Dod08g1165 408 MobiDBLite consensus disorder prediction 266 285 - -
Dod08g1165 408 PANTHER OS05G0427100 PROTEIN-RELATED 6 372 - -
Dod08g1165 408 CDD PB1_UP2 52 151 - -
Dod08g1165 408 MobiDBLite consensus disorder prediction 195 209 - -
Dod08g1165 408 SMART PB1_new 63 153 IPR000270 GO:0005515
Dod08g1165 408 MobiDBLite consensus disorder prediction 193 250 - -
Dod08g1165 408 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1165 Dod-Chr8 15089527 15091165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1165 47 154 MAP Kinase Kinase Kinase AT5G57610 50.000 2.56e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1165 - - adu:107459343 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1165 08 15089527 15091165 Dod08g1165 08 15089527 15091165 ECH