Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1150 ATGGCAAACCAAGAAAAGCAGAAACATCCAGAAACCATGGAAGAGGTCTTGAATTCTGTTAACCACGCTTGTGAGTTAGCAAAGAAAATTGCATCTGAACTAACCAACATGGCCAACCAGCCTGATACACTGTCCTCATCAATTGATGAGGTAGTGAAGGCATTCACTGCTGCCAAAGAGAGGCTTTTGATGATGAACACGATGATGGTGGTGCCCCAACTAGACCAATCAATAGCAAGCTCTTCCTTTGCTCCAATGCTGACACATGGGGCTATTCAGCATGCTCATCAGATGGGTGCAACTTCAATGCAGGAATGGCTAAGGTACTCTGCAAGTTGTGGACCCACAATGGATCAGTGGTTGCAAATGCAACAACAACCATTAGATGTGAGGGACTTGATGGGTGGTATGGACCTTCATCCTCAGCAGTTAAGGCAAAGGGGCACCCTGCAGATTGGTGAAACTGGTGGTGGGAGGGATGTGGAAGGTTCAGAGAAATCAAAGGGGTCTGAAGGAGAAGCTCAAGGAATAGAAGCATCACCCTCAAGACCAAGGAAAAGGAAGAGTGATGCGGAGAAGAGAACAATGCTATTTCCTGCTCCAATGGTTGGAAACACCGAAATGCCTCAGGAAGATGGTTTCACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGCTCCAAGTATCCAAGGAGTTACTATAGGTGTACCCATCAGAAACTGTACGGATGCCCAGCGAAAAAGCAAGTACAGCGACTTGATCATAGTCCTAACATATTTGAAGTAACATACCGAGGTGAACACACCTGCCACATGTCCTTAACAGCACCATCATCATTTCCTCCGCCACCACCACAACCACTGGTGGATATCTCAAAGGACATGGCTCAAAGTAGCACACCAACCCAGTTGTCTCCATCATCAACTTCAGTTTCAAGCTGGTTGCAATCATCAATGAACCTCAGCCTCCGCAGCCGCGGCAGCGACGGTGGCGGTGGAGGTGGCAGTGGTGTACCCTCAACTTCAAAATATGGTGCTGATTATCTGGTGGCAGACATGGCTGATGCCATGTTTAACTCAGGTAGTAGCAGTGGTAACAGTATGGAATCTCTCTTCCCTGTCAATGAAGATAAAAGGGAACCAAGTGAAAAGAAAAGCTGA 1161 0.4686 MANQEKQKHPETMEEVLNSVNHACELAKKIASELTNMANQPDTLSSSIDEVVKAFTAAKERLLMMNTMMVVPQLDQSIASSSFAPMLTHGAIQHAHQMGATSMQEWLRYSASCGPTMDQWLQMQQQPLDVRDLMGGMDLHPQQLRQRGTLQIGETGGGRDVEGSEKSKGSEGEAQGIEASPSRPRKRKSDAEKRTMLFPAPMVGNTEMPQEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYGCPAKKQVQRLDHSPNIFEVTYRGEHTCHMSLTAPSSFPPPPPQPLVDISKDMAQSSTPTQLSPSSTSVSSWLQSSMNLSLRSRGSDGGGGGGSGVPSTSKYGADYLVADMADAMFNSGSSSGNSMESLFPVNEDKREPSEKKS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1150 386 MobiDBLite consensus disorder prediction 144 197 - -
Dod08g1150 386 PANTHER WRKY TRANSCRIPTION FACTOR 55 13 324 - -
Dod08g1150 386 SUPERFAMILY WRKY DNA-binding domain 207 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1150 386 MobiDBLite consensus disorder prediction 180 194 - -
Dod08g1150 386 ProSiteProfiles WRKY domain profile. 205 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1150 386 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 324 IPR044810 GO:0003700
Dod08g1150 386 SMART WRKY_cls 210 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1150 386 Pfam WRKY DNA -binding domain 211 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1150 386 Gene3D WRKY domain 202 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1150 386 MobiDBLite consensus disorder prediction 357 371 - -
Dod08g1150 386 MobiDBLite consensus disorder prediction 292 325 - -
Dod08g1150 386 MobiDBLite consensus disorder prediction 357 386 - -
Dod08g1150 386 MobiDBLite consensus disorder prediction 274 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1150 Dod-Chr8 14745341 14748674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1150 13 376 WRKY Transcription Factor Family AT2G40740 35.326 1.37e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1150 WRKY 1.5e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1150 08 14745341 14748674 Dod08g1150 08 14745341 14748674 ECH