Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1149 ATGGATACCCTTTGCCCTGATGAGAGTGTGTCAGCCAGTAAATGGAAGAGAGTGATTATCAAAAAGCTTGTTCAGGGTCAGGAGGCAGCAACTCAGCTAAAGCACCTGCTTCAGAAGCCCTTTGGCGCTGATGAAGGGTCTCTCTCCGCTGAGGAGCTTTTGGCCAATGTTCAGAGATCTTTCACTGAGAGCCTTTCTGTTTTCACTTCCAATTCCCCCGCCGAGAACGGGTCGCTGGCGGAGGCAGCTTCCGGCAATGATGATTCCGGTGAGGGTTGGAAGAGATCCTCTCCACCCACAAAGAATGGAGGAAGAGGTTGCTACAAAAGAAGGAGGACTGCACTTTCATGGACCATAGTCTCCGCCACTGCTGATGATGATCATGCATGGAGGAAATATGGACAAAAAGATATACAGAATTCTAAATTCCCTAGGAGTTACTTCAGGTGCACCCGAAAGTCTGATCAAGGTTGCTGTGCAACGAAACAGGTGCAGCGGACACAGGAGAATCCTGAAATGTACCTAACTACATACATTGGCATGCACACATGCGAAGCCATCCCCAAGCCTCCACATTTGGTCATGGATTCTAATACTCCATTTCTTGTGAATTCTCATCCTGATTCCAATGAACAGGATCACCCTATTATTAGCTCACCAACTCCAACTATCAAACAAGAAAATTTGGAAGAAGGCACTCCAGGTGATGTTAATGTTACAGATCACAAGTTGGATCCTACCATATGGTCAGATTTGAAGGAAATTGAAACATCCAAGCCTTCCATTATGCCCTTAAAAATGGCATCTGATCATAATGCAGACACTGTGTATTCATCATGTTCAGGCTCTCATCACAATCTGGACATGGATTTTGGGGTGGATTCTGTTCATTTTGGCACTCATGGCTTTCCCTTTGATGACAGTCATGGGTTGCTTTGA 939 0.4569 MDTLCPDESVSASKWKRVIIKKLVQGQEAATQLKHLLQKPFGADEGSLSAEELLANVQRSFTESLSVFTSNSPAENGSLAEAASGNDDSGEGWKRSSPPTKNGGRGCYKRRRTALSWTIVSATADDDHAWRKYGQKDIQNSKFPRSYFRCTRKSDQGCCATKQVQRTQENPEMYLTTYIGMHTCEAIPKPPHLVMDSNTPFLVNSHPDSNEQDHPIISSPTPTIKQENLEEGTPGDVNVTDHKLDPTIWSDLKEIETSKPSIMPLKMASDHNADTVYSSCSGSHHNLDMDFGVDSVHFGTHGFPFDDSHGLL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1149 312 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1149 312 MobiDBLite consensus disorder prediction 71 107 - -
Dod08g1149 312 SUPERFAMILY WRKY DNA-binding domain 120 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1149 312 Gene3D WRKY domain 111 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1149 312 ProSiteProfiles WRKY domain profile. 119 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1149 312 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 288 IPR044810 GO:0003700
Dod08g1149 312 Pfam WRKY DNA -binding domain 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1149 312 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 5 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1149 Dod-Chr8 14729144 14740894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1149 16 191 WRKY Transcription Factor Family AT3G56400 41.711 4.67e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1149 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1149 - - gmx:100796599 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1149 08 14729144 14740894 Dod09g1704 09 38763579 38766028 ECH
Dod08g1149 08 14729144 14740894 Dod08g1149 08 14729144 14740894 ECH