Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1148 ATGAAGAGAGTGACCATCAGAAAACTTGTTGAGGGCCACGAGGCTGCAACTCAGCTGAAGCTTCTGCTTCAGAAGCCCTTTGGTGCTGATGATGAAGGGCGGTCAATCTCAGTTGGTGAGCTTGCGGCCAATGTTCAGAGATCTTTCACTGACAGCCTTTCCATTCTCACTTCTGATTCTGCCGGCGAAAATGGGTCGCCGGCTGCGGCTCCGACAATGAGTGTAGATTCCGGTGAGGGTAGGAAGAGATCTTCGCCACCAACAAAGAACAGAGCAAGAGGTTTCTTCAAAACAAGGAGGAATGCACAGTCATGGATAGTCTCCCCCACTGCCCATGATAATCATGCATGGAGGAAGTACGGACAAAAGGAAATCTTGAATTCTAAATTGCCTAGGAGTTACTTCAGGTGCACCCGAAAGTATGATCAAGGTTGCTGTGCAACCAAGCTGGTGCAGCGGACACAGGAGAATCCTGAAATGTACCTAACTACATACATTGGCATTCACACATGCAAAGCCACCCTCAAGCATCCACATTTGGTCATGGATTCTAATACTTCATTTCTTGTCAATTCTCATCCCGATTCTAATAAGCTACTAAACGAACATGATGATCACCCACCAAGTCCAATAACAAAACATTCCAAAGAAGACACTCCTAGGAGTTTTGTAACAGATCACATGTTGGATTCTACACTTTGGTCATATTTGAAGGATTTTGAAGCATCCAAGCCTTCAATTATGCCCTTAAAGATGGTATCTGATAATCCAGACACTTTGTATTCATCATGTGCAGGCTGTCAAAGTCTGGGCATGGATTTTGGGGTGGATACTGTTCATTTTGACACTCATGACTTCCACTTTGATGACAGACATGAACAAATGAGTTGCTTTGATGCTTTATCAGCTTCTTTTCCTTAA 921 0.4419 MKRVTIRKLVEGHEAATQLKLLLQKPFGADDEGRSISVGELAANVQRSFTDSLSILTSDSAGENGSPAAAPTMSVDSGEGRKRSSPPTKNRARGFFKTRRNAQSWIVSPTAHDNHAWRKYGQKEILNSKLPRSYFRCTRKYDQGCCATKLVQRTQENPEMYLTTYIGIHTCKATLKHPHLVMDSNTSFLVNSHPDSNKLLNEHDDHPPSPITKHSKEDTPRSFVTDHMLDSTLWSYLKDFEASKPSIMPLKMVSDNPDTLYSSCAGCQSLGMDFGVDTVHFDTHDFHFDDRHEQMSCFDALSASFP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1148 306 MobiDBLite consensus disorder prediction 56 93 - -
Dod08g1148 306 MobiDBLite consensus disorder prediction 56 71 - -
Dod08g1148 306 ProSiteProfiles WRKY domain profile. 113 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1148 306 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 2 271 - -
Dod08g1148 306 SUPERFAMILY WRKY DNA-binding domain 108 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1148 306 SMART WRKY_cls 111 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1148 306 MobiDBLite consensus disorder prediction 197 220 - -
Dod08g1148 306 Pfam WRKY DNA -binding domain 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1148 306 Gene3D WRKY domain 98 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1148 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 271 IPR044810 GO:0003700
Dod08g1148 306 MobiDBLite consensus disorder prediction 195 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1148 Dod-Chr8 14705421 14717520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1148 2 220 WRKY Transcription Factor Family AT3G56400 35.931 8.29e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1148 WRKY 2.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1148 - - gmx:100170683 247.284