Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1147 ATGCAGCTGCCACATCCAAACGCGGCCTCCATGCTAAGGAGCAGAACAGCACTACCTCCACCAACACCACTCCTGGCCCTCAGCACGAGAATGCTGTCGCCGTCGCCGTCCTCCGCCGCCGCCGAAACCAGGCTACCCTCCTTCGCCACCACTTCTTCCCCTTCCCGCAGCAACCCAAAACCCCCGTTCCACCACCTCCCTCTCTCGTCCTCAAGCTCTAACGCCCTTCATAGCATGACGACCCTTTCCAAGTGCTTCTCCTCTGGAGCCGCCACCACAACAACCCCAATCCCCATATCGGGAACGCCCGAACCCGAAAACCCGGAACCCGAATCCGACGTGGCATGCTCCCTCGTCGTGGTTTCCTTCTACAAGTTCGCGGATTTCCCTGACCATGCCCGTTTGAGAAGGCCCTTGAAGGAGCTCTGCCAACAACTGTGTGTTTCAGGCGGTATTATTCTTGCGCCTGAAGGAGTCAACGGCAGCATATGTGGCACTCGGGTGTCAGTGGAGAAAGTTCTTGCATTTATACAAAGTGATGACCGATTGAAGGGACTAAGACGAGTTGAATCGCCTGTTAGTCCTGAGGAGGAAGCTATTCACCATGGACACAGTGCCAGTGCTCCTCTTGCTGCAGGGGAAGATGCACCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTGCTATCTCACCTATTGAAAGGGTTGGGAAGTATGTTGGCCCAGAAGATTGGAATGCTTTGATTAGCAATCCAGATACAGTGGTGATTGATGTGCGGAATAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGTACTACATCATTTCGTGAATTCCCATCTTGGGTAGAGGAGCATTTCCAGCTTACCAGAGGTGGGCTTCCAGAAGTTGAGGTAAACAATTCAGTCCAAAGTGATGAGAAGGAAATGGAGAATCCAAAACAACATATGCCAAAACGTGTTGCTATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCAACGAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGACACAGAGCCTCTGGGAGGGAGAGTGTTTTGTCTTTGACAAACGGGTCTCTGTCGAGCATGGTTTGGTGCAAGGAAACTTCAAGCTCTGCTATGGTTGCAAGCAACCTGTGAGTGATGCTGACATGGAAGCCCCAGAATATGAATATGGAGTTTCTTGTCCTCACTGTTTTTCACTGAAATCAGAAGAGGAGAAGGAGAGGGCTCGGGCGCGGCAACGGCAATTTGAGAGATGGGGAATAATAGGTGGCCCGGATAAGGGTCGCCGGCCAACAACTAAACCAGATGATGATGGCAGCAGGAAACCAAACCAGCTTTCACGTTCTGTTTAA 1458 0.5041 MQLPHPNAASMLRSRTALPPPTPLLALSTRMLSPSPSSAAAETRLPSFATTSSPSRSNPKPPFHHLPLSSSSSNALHSMTTLSKCFSSGAATTTTPIPISGTPEPENPEPESDVACSLVVVSFYKFADFPDHARLRRPLKELCQQLCVSGGIILAPEGVNGSICGTRVSVEKVLAFIQSDDRLKGLRRVESPVSPEEEAIHHGHSASAPLAAGEDAPFRWDHVRVKLKKEIVTLGMPAISPIERVGKYVGPEDWNALISNPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLTRGGLPEVEVNNSVQSDEKEMENPKQHMPKRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPETQSLWEGECFVFDKRVSVEHGLVQGNFKLCYGCKQPVSDADMEAPEYEYGVSCPHCFSLKSEEEKERARARQRQFERWGIIGGPDKGRRPTTKPDDDGSRKPNQLSRSV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1147 485 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 117 464 IPR020936 -
Dod08g1147 485 Hamap tRNA uridine(34) hydroxylase [trhO]. 116 416 IPR020936 -
Dod08g1147 485 CDD RHOD_YceA 246 372 - -
Dod08g1147 485 Pfam Rhodanese-like domain 255 372 IPR001763 -
Dod08g1147 485 MobiDBLite consensus disorder prediction 1 70 - -
Dod08g1147 485 MobiDBLite consensus disorder prediction 443 485 - -
Dod08g1147 485 Gene3D - 109 232 - -
Dod08g1147 485 ProSiteProfiles Rhodanese domain profile. 259 379 IPR001763 -
Dod08g1147 485 Gene3D - 233 414 IPR036873 -
Dod08g1147 485 Pfam UPF0176 acylphosphatase like domain 119 231 IPR040503 -
Dod08g1147 485 SMART rhod_4 249 376 IPR001763 -
Dod08g1147 485 MobiDBLite consensus disorder prediction 28 70 - -
Dod08g1147 485 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 117 464 - -
Dod08g1147 485 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 228 405 IPR036873 -
Dod08g1147 485 MobiDBLite consensus disorder prediction 464 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1147 Dod-Chr8 14682753 14687244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1147 68 485 Sulfurtransferasese or Rhodanese AT2G40760 68.632 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1147 - - gmx:100784854 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1147 08 14682753 14687244 Dod08g1147 08 14682753 14687244 ECH